Information for 11-GCTGCTAATCCAA (Motif 10)

C A T G T G A C C G A T A C T G G T A C C G A T C G T A C G T A A G C T A G T C G A T C G C T A C T G A
Reverse Opposite:
A G C T C G A T C T A G C T A G T C G A C G A T C G A T C G T A C A T G T G A C G C T A A C T G G A T C
p-value:1e-11
log p-value:-2.651e+01
Information Content per bp:1.665
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.22%
Number of Background Sequences with motif93.5
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets60.3 +/- 20.2bp
Average Position of motif in Background52.5 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:1
Score:0.71
Offset:3
Orientation:forward strand
Alignment:GCTGCTAATCCAA
---GCTAATCC--
 C A T G T G A C C G A T A C T G G T A C C G A T C G T A C G T A A G C T A G T C G A T C G C T A C T G A
A C G T A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:2
Score:0.66
Offset:4
Orientation:forward strand
Alignment:GCTGCTAATCCAA
----TTAATCCC-
 C A T G T G A C C G A T A C T G G T A C C G A T C G T A C G T A A G C T A G T C G A T C G C T A C T G A
A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T

PITX3/MA0714.1/Jaspar

Match Rank:3
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GCTGCTAATCCAA
---CTTAATCCC-
 C A T G T G A C C G A T A C T G G T A C C G A T C G T A C G T A A G C T A G T C G A T C G C T A C T G A
A C G T A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:4
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:GCTGCTAATCCAA
----YTAATCCY-
 C A T G T G A C C G A T A C T G G T A C C G A T C G T A C G T A A G C T A G T C G A T C G C T A C T G A
A C G T A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T

GSC/MA0648.1/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GCTGCTAATCCAA
---GCTAATCCCC
 C A T G T G A C C G A T A C T G G T A C C G A T C G T A C G T A A G C T A G T C G A T C G C T A C T G A
A C G T A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:6
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GCTGCTAATCCAA
---NYTAATCCYB
 C A T G T G A C C G A T A C T G G T A C C G A T C G T A C G T A A G C T A G T C G A T C G C T A C T G A
A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GCTGCTAATCCAA
-----TAATCCCN
 C A T G T G A C C G A T A C T G G T A C C G A T C G T A C G T A A G C T A G T C G A T C G C T A C T G A
A C G T A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

PH0139.1_Pitx3/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCTGCTAATCCAA--
GNNAGCTAATCCCCCN
 A C G T C A T G T G A C C G A T A C T G G T A C C G A T C G T A C G T A A G C T A G T C G A T C G C T A C T G A A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

OTX2/MA0712.1/Jaspar

Match Rank:9
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GCTGCTAATCCAA
----TTAATCCT-
 C A T G T G A C C G A T A C T G G T A C C G A T C G T A C G T A A G C T A G T C G A T C G C T A C T G A
A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:10
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GCTGCTAATCCAA
---CCTAATCCGC
 C A T G T G A C C G A T A C T G G T A C C G A T C G T A C G T A A G C T A G T C G A T C G C T A C T G A
A C G T A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C