Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-225 | -5.186e+02 | 0.0000 | 361.0 | 55.62% | 3510.4 | 7.43% | motif file (matrix) |
svg |
2 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-217 | -4.997e+02 | 0.0000 | 308.0 | 47.46% | 2322.8 | 4.91% | motif file (matrix) |
svg |
3 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-209 | -4.815e+02 | 0.0000 | 321.0 | 49.46% | 2794.1 | 5.91% | motif file (matrix) |
svg |
4 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-204 | -4.705e+02 | 0.0000 | 318.0 | 49.00% | 2820.1 | 5.97% | motif file (matrix) |
svg |
5 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-154 | -3.553e+02 | 0.0000 | 266.0 | 40.99% | 2621.6 | 5.55% | motif file (matrix) |
svg |
6 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-150 | -3.473e+02 | 0.0000 | 181.0 | 27.89% | 889.3 | 1.88% | motif file (matrix) |
svg |
7 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-127 | -2.931e+02 | 0.0000 | 231.0 | 35.59% | 2377.6 | 5.03% | motif file (matrix) |
svg |
8 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-118 | -2.717e+02 | 0.0000 | 198.0 | 30.51% | 1770.4 | 3.75% | motif file (matrix) |
svg |
9 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-112 | -2.589e+02 | 0.0000 | 213.0 | 32.82% | 2291.1 | 4.85% | motif file (matrix) |
svg |
10 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-111 | -2.566e+02 | 0.0000 | 239.0 | 36.83% | 3080.5 | 6.52% | motif file (matrix) |
svg |
11 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-92 | -2.136e+02 | 0.0000 | 203.0 | 31.28% | 2607.7 | 5.52% | motif file (matrix) |
svg |
12 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-91 | -2.100e+02 | 0.0000 | 152.0 | 23.42% | 1301.0 | 2.75% | motif file (matrix) |
svg |
13 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-84 | -1.955e+02 | 0.0000 | 270.0 | 41.60% | 5371.1 | 11.36% | motif file (matrix) |
svg |
14 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-37 | -8.607e+01 | 0.0000 | 179.0 | 27.58% | 4596.1 | 9.72% | motif file (matrix) |
svg |
15 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-30 | -7.063e+01 | 0.0000 | 130.0 | 20.03% | 2992.2 | 6.33% | motif file (matrix) |
svg |
16 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-29 | -6.845e+01 | 0.0000 | 94.0 | 14.48% | 1674.1 | 3.54% | motif file (matrix) |
svg |
17 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-29 | -6.761e+01 | 0.0000 | 121.0 | 18.64% | 2717.7 | 5.75% | motif file (matrix) |
svg |
18 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-28 | -6.503e+01 | 0.0000 | 98.0 | 15.10% | 1899.9 | 4.02% | motif file (matrix) |
svg |
19 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-16 | -3.847e+01 | 0.0000 | 111.0 | 17.10% | 3383.7 | 7.16% | motif file (matrix) |
svg |
20 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-15 | -3.640e+01 | 0.0000 | 182.0 | 28.04% | 7269.0 | 15.38% | motif file (matrix) |
svg |
21 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-14 | -3.243e+01 | 0.0000 | 78.0 | 12.02% | 2127.2 | 4.50% | motif file (matrix) |
svg |
22 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-11 | -2.590e+01 | 0.0000 | 70.0 | 10.79% | 2050.6 | 4.34% | motif file (matrix) |
svg |
23 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-10 | -2.351e+01 | 0.0000 | 111.0 | 17.10% | 4264.8 | 9.02% | motif file (matrix) |
svg |
24 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-10 | -2.337e+01 | 0.0000 | 69.0 | 10.63% | 2125.3 | 4.50% | motif file (matrix) |
svg |
25 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-9 | -2.252e+01 | 0.0000 | 119.0 | 18.34% | 4779.9 | 10.11% | motif file (matrix) |
svg |
26 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-9 | -2.231e+01 | 0.0000 | 37.0 | 5.70% | 786.8 | 1.66% | motif file (matrix) |
svg |
27 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-8 | -1.938e+01 | 0.0000 | 75.0 | 11.56% | 2646.4 | 5.60% | motif file (matrix) |
svg |
28 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-8 | -1.926e+01 | 0.0000 | 251.0 | 38.67% | 13296.0 | 28.13% | motif file (matrix) |
svg |
29 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-8 | -1.900e+01 | 0.0000 | 140.0 | 21.57% | 6303.0 | 13.33% | motif file (matrix) |
svg |
30 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-7 | -1.653e+01 | 0.0000 | 52.0 | 8.01% | 1670.7 | 3.53% | motif file (matrix) |
svg |
31 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-7 | -1.620e+01 | 0.0000 | 102.0 | 15.72% | 4356.8 | 9.22% | motif file (matrix) |
svg |
32 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-6 | -1.527e+01 | 0.0000 | 35.0 | 5.39% | 948.2 | 2.01% | motif file (matrix) |
svg |
33 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-5 | -1.333e+01 | 0.0000 | 44.0 | 6.78% | 1460.8 | 3.09% | motif file (matrix) |
svg |
34 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-5 | -1.248e+01 | 0.0000 | 10.0 | 1.54% | 109.7 | 0.23% | motif file (matrix) |
svg |
35 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-5 | -1.208e+01 | 0.0001 | 35.0 | 5.39% | 1096.6 | 2.32% | motif file (matrix) |
svg |
36 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-5 | -1.192e+01 | 0.0001 | 57.0 | 8.78% | 2223.5 | 4.70% | motif file (matrix) |
svg |
37 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-4 | -1.089e+01 | 0.0002 | 153.0 | 23.57% | 8106.1 | 17.15% | motif file (matrix) |
svg |
38 |
| HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer | 1e-4 | -1.039e+01 | 0.0003 | 38.0 | 5.86% | 1340.5 | 2.84% | motif file (matrix) |
svg |
39 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-4 | -1.034e+01 | 0.0003 | 38.0 | 5.86% | 1343.9 | 2.84% | motif file (matrix) |
svg |
40 |
| Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer | 1e-4 | -1.026e+01 | 0.0003 | 42.0 | 6.47% | 1553.0 | 3.29% | motif file (matrix) |
svg |
41 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-4 | -9.982e+00 | 0.0004 | 40.0 | 6.16% | 1469.1 | 3.11% | motif file (matrix) |
svg |
42 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-4 | -9.965e+00 | 0.0004 | 16.0 | 2.47% | 356.0 | 0.75% | motif file (matrix) |
svg |
43 |
| Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer | 1e-4 | -9.584e+00 | 0.0006 | 85.0 | 13.10% | 4049.0 | 8.56% | motif file (matrix) |
svg |
44 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-4 | -9.370e+00 | 0.0007 | 62.0 | 9.55% | 2724.0 | 5.76% | motif file (matrix) |
svg |
45 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-3 | -9.205e+00 | 0.0008 | 36.0 | 5.55% | 1316.7 | 2.79% | motif file (matrix) |
svg |
46 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-3 | -8.764e+00 | 0.0012 | 20.0 | 3.08% | 566.2 | 1.20% | motif file (matrix) |
svg |
47 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-3 | -8.626e+00 | 0.0014 | 30.0 | 4.62% | 1049.4 | 2.22% | motif file (matrix) |
svg |
48 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-3 | -8.531e+00 | 0.0015 | 27.0 | 4.16% | 906.8 | 1.92% | motif file (matrix) |
svg |
49 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-3 | -8.368e+00 | 0.0017 | 114.0 | 17.57% | 6008.6 | 12.71% | motif file (matrix) |
svg |
50 |
| E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-3 | -8.310e+00 | 0.0018 | 61.0 | 9.40% | 2775.3 | 5.87% | motif file (matrix) |
svg |
51 |
| Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer | 1e-3 | -8.300e+00 | 0.0018 | 60.0 | 9.24% | 2718.4 | 5.75% | motif file (matrix) |
svg |
52 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-3 | -8.163e+00 | 0.0020 | 35.0 | 5.39% | 1338.5 | 2.83% | motif file (matrix) |
svg |
53 |
| Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer | 1e-3 | -8.149e+00 | 0.0020 | 21.0 | 3.24% | 641.0 | 1.36% | motif file (matrix) |
svg |
54 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-3 | -8.103e+00 | 0.0020 | 26.0 | 4.01% | 882.9 | 1.87% | motif file (matrix) |
svg |
55 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-3 | -7.884e+00 | 0.0025 | 39.0 | 6.01% | 1574.8 | 3.33% | motif file (matrix) |
svg |
56 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-3 | -7.422e+00 | 0.0039 | 20.0 | 3.08% | 630.5 | 1.33% | motif file (matrix) |
svg |
57 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-3 | -7.418e+00 | 0.0039 | 29.0 | 4.47% | 1078.1 | 2.28% | motif file (matrix) |
svg |
58 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-3 | -6.940e+00 | 0.0061 | 26.0 | 4.01% | 956.9 | 2.02% | motif file (matrix) |
svg |
59 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-2 | -6.660e+00 | 0.0079 | 76.0 | 11.71% | 3885.3 | 8.22% | motif file (matrix) |
svg |
60 |
| MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer | 1e-2 | -6.042e+00 | 0.0144 | 23.0 | 3.54% | 863.2 | 1.83% | motif file (matrix) |
svg |
61 |
| GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer | 1e-2 | -6.029e+00 | 0.0144 | 7.0 | 1.08% | 130.4 | 0.28% | motif file (matrix) |
svg |
62 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-2 | -5.981e+00 | 0.0148 | 13.0 | 2.00% | 376.1 | 0.80% | motif file (matrix) |
svg |
63 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-2 | -5.979e+00 | 0.0148 | 61.0 | 9.40% | 3059.8 | 6.47% | motif file (matrix) |
svg |
64 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-2 | -5.944e+00 | 0.0149 | 45.0 | 6.93% | 2103.3 | 4.45% | motif file (matrix) |
svg |
65 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.870e+00 | 0.0158 | 13.0 | 2.00% | 381.3 | 0.81% | motif file (matrix) |
svg |
66 |
| MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer | 1e-2 | -5.853e+00 | 0.0158 | 48.0 | 7.40% | 2291.5 | 4.85% | motif file (matrix) |
svg |
67 |
| E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer | 1e-2 | -5.847e+00 | 0.0158 | 59.0 | 9.09% | 2955.5 | 6.25% | motif file (matrix) |
svg |
68 |
| ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer | 1e-2 | -5.828e+00 | 0.0158 | 71.0 | 10.94% | 3699.4 | 7.83% | motif file (matrix) |
svg |
69 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-2 | -5.698e+00 | 0.0177 | 46.0 | 7.09% | 2191.6 | 4.64% | motif file (matrix) |
svg |
70 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-2 | -5.338e+00 | 0.0250 | 195.0 | 30.05% | 12042.6 | 25.47% | motif file (matrix) |
svg |
71 |
| GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer | 1e-2 | -5.058e+00 | 0.0326 | 9.0 | 1.39% | 238.5 | 0.50% | motif file (matrix) |
svg |
72 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-2 | -4.730e+00 | 0.0446 | 34.0 | 5.24% | 1596.0 | 3.38% | motif file (matrix) |
svg |
73 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-2 | -4.662e+00 | 0.0471 | 12.0 | 1.85% | 394.8 | 0.84% | motif file (matrix) |
svg |
74 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-2 | -4.626e+00 | 0.0482 | 40.0 | 6.16% | 1966.5 | 4.16% | motif file (matrix) |
svg |