Information for 17-TGTAAGGGACACC (Motif 20)

A C G T A C T G C G A T C G T A C G T A A C T G C T A G A C T G C G T A A T G C C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A T C G C G A T A G T C A G T C A G T C A C G T A C G T C G T A A G T C C G T A
p-value:1e-8
log p-value:-2.035e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets25.0 +/- 15.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGTAAGGGACACC-----
-ATAAATGACACCTATCA
 A C G T A C T G C G A T C G T A C G T A A C T G C T A G A C T G C G T A A T G C C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

PB0117.1_Eomes_2/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGTAAGGGACACC-----
--NNGGCGACACCTCNNN
 A C G T A C T G C G A T C G T A C G T A A C T G C T A G A C T G C G T A A T G C C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGTAAGGGACACC
ANGNAAAGGTCA--
 A C G T A C G T A C T G C G A T C G T A C G T A A C T G C T A G A C T G C G T A A T G C C G T A A G T C A G T C
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGTAAGGGACACC--
TCTCAAAGGTCACCTG
 A C G T A C G T A C T G C G A T C G T A C G T A A C T G C T A G A C T G C G T A A T G C C G T A A G T C A G T C A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGTAAGGGACACC--
TCTCAAAGGTCACGAG
 A C G T A C G T A C T G C G A T C G T A C G T A A C T G C T A G A C T G C G T A A T G C C G T A A G T C A G T C A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TGTAAGGGACACC
-GRAASTGAAAST
 A C G T A C T G C G A T C G T A C G T A A C T G C T A G A C T G C G T A A T G C C G T A A G T C A G T C
A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

IRF2/MA0051.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TGTAAGGGACACC-----
GGAAAGCGAAACCAAAAC
 A C G T A C T G C G A T C G T A C G T A A C T G C T A G A C T G C G T A A T G C C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGTAAGGGACACC
-GAAACTGAAACT
 A C G T A C T G C G A T C G T A C G T A A C T G C T A G A C T G C G T A A T G C C G T A A G T C A G T C
A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGTAAGGGACACC
CGGAAGTGAAAC-
 A C G T A C T G C G A T C G T A C G T A A C T G C T A G A C T G C G T A A T G C C G T A A G T C A G T C
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TGTAAGGGACACC
-GAAAMTGAAACT
 A C G T A C T G C G A T C G T A C G T A A C T G C T A G A C T G C G T A A T G C C G T A A G T C A G T C
A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T