Information for 9-YYCCTGTGSACRCMAS (Motif 14)

A G C T A G T C A G T C A G T C A C G T A C T G A C G T C T A G A T G C C G T A A G T C C T G A A G T C G T C A C T G A A T G C
Reverse Opposite:
A T C G A G C T A C G T A C T G A G C T A C T G A C G T A T C G A G T C C G T A A G T C C G T A A C T G A C T G C T A G C T G A
p-value:1e-9
log p-value:-2.280e+01
Information Content per bp:1.852
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.6 +/- 19.7bp
Average Position of motif in Background78.5 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:YYCCTGTGSACRCMAS-
TACATGTGCACATAAAA
 A G C T A G T C A G T C A G T C A C G T A C T G A C G T C T A G A T G C C G T A A G T C C T G A A G T C G T C A C T G A A T G C A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:YYCCTGTGSACRCMAS-
CAGATGTGCACATACGT
 A G C T A G T C A G T C A G T C A C G T A C T G A C G T C T A G A T G C C G T A A G T C C T G A A G T C G T C A C T G A A T G C A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:YYCCTGTGSACRCMAS
--GCTGTG--------
 A G C T A G T C A G T C A G T C A C G T A C T G A C G T C T A G A T G C C G T A A G T C C T G A A G T C G T C A C T G A A T G C
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-YYCCTGTGSACRCMAS
NNNVCTGWGYAAACASN
 A C G T A G C T A G T C A G T C A G T C A C G T A C T G A C G T C T A G A T G C C G T A A G T C C T G A A G T C G T C A C T G A A T G C
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--YYCCTGTGSACRCMAS
ACTTCCTGTT--------
 A C G T A C G T A G C T A G T C A G T C A G T C A C G T A C T G A C G T C T A G A T G C C G T A A G T C C T G A A G T C G T C A C T G A A T G C
T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--YYCCTGTGSACRCMAS
GGGCCGTGTGCAAAAA--
 A C G T A C G T A G C T A G T C A G T C A G T C A C G T A C T G A C G T C T A G A T G C C G T A A G T C C T G A A G T C G T C A C T G A A T G C
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-YYCCTGTGSACRCMAS
TCCCCTGGGGAC-----
 A C G T A G C T A G T C A G T C A G T C A C G T A C T G A C G T C T A G A T G C C G T A A G T C C T G A A G T C G T C A C T G A A T G C
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--YYCCTGTGSACRCMAS
ATTTCCTGTN--------
 A C G T A C G T A G C T A G T C A G T C A G T C A C G T A C T G A C G T C T A G A T G C C G T A A G T C C T G A A G T C G T C A C T G A A T G C
C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:YYCCTGTGSACRCMAS
--CNTGTTTACATA--
 A G C T A G T C A G T C A G T C A C G T A C T G A C G T C T A G A T G C C G T A A G T C C T G A A G T C G T C A C T G A A T G C
A C G T A C G T A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:YYCCTGTGSACRCMAS
--SCTGTCARCACC--
 A G C T A G T C A G T C A G T C A C G T A C T G A C G T C T A G A T G C C G T A A G T C C T G A A G T C G T C A C T G A A T G C
A C G T A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T