Information for 11-AAKCCTGCCGTCT (Motif 12)

T G C A G C T A C A G T G T A C G A T C C A G T A C T G G A T C G T A C A C T G G C A T G A T C C G A T
Reverse Opposite:
C G T A C A T G C G T A T G A C C A T G C T A G G T A C G C T A C A T G A C T G G T C A C A G T A C G T
p-value:1e-10
log p-value:-2.459e+01
Information Content per bp:1.686
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.77%
Number of Background Sequences with motif159.2
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets49.5 +/- 18.2bp
Average Position of motif in Background50.4 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAKCCTGCCGTCT
TAATCCCN------
 A C G T T G C A G C T A C A G T G T A C G A T C C A G T A C T G G A T C G T A C A C T G G C A T G A T C C G A T
C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:2
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AAKCCTGCCGTCT
NYTAATCCYB------
 A C G T A C G T A C G T T G C A G C T A C A G T G T A C G A T C C A G T A C T G G A T C G T A C A C T G G C A T G A T C C G A T
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAKCCTGCCGTCT
ACATCCTGNT----
 A C G T T G C A G C T A C A G T G T A C G A T C C A G T A C T G G A T C G T A C A C T G G C A T G A T C C G A T
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AAKCCTGCCGTCT
TTAATCCT-------
 A C G T A C G T T G C A G C T A C A G T G T A C G A T C C A G T A C T G G A T C G T A C A C T G G C A T G A T C C G A T
G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:5
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------AAKCCTGCCGTCT
NNNATTAATCCGNTTNA--
 A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C T A C A G T G T A C G A T C C A G T A C T G G A T C G T A C A C T G G C A T G A T C C G A T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A A C G T A C G T

PH0025.1_Dmbx1/Jaspar

Match Rank:6
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------AAKCCTGCCGTCT
NNNATTAATCCGNTTNA--
 A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C T A C A G T G T A C G A T C C A G T A C T G G A T C G T A C A C T G G C A T G A T C C G A T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AAKCCTGCCGTCT
CTTAATCCC-------
 A C G T A C G T A C G T T G C A G C T A C A G T G T A C G A T C C A G T A C T G G A T C G T A C A C T G G C A T G A T C C G A T
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AAKCCTGCCGTCT
GCTAATCC--------
 A C G T A C G T A C G T T G C A G C T A C A G T G T A C G A T C C A G T A C T G G A T C G T A C A C T G G C A T G A T C C G A T
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AAKCCTGCCGTCT
ATAATCCC-------
 A C G T A C G T T G C A G C T A C A G T G T A C G A T C C A G T A C T G G A T C G T A C A C T G G C A T G A T C C G A T
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AAKCCTGCCGTCT
TTAATCCC-------
 A C G T A C G T T G C A G C T A C A G T G T A C G A T C C A G T A C T G G A T C G T A C A C T G G C A T G A T C C G A T
G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T