Information for 8-GAGACTTAAAAMCARG (Motif 11)

A C T G C T G A A C T G T C G A A T G C A C G T A C G T G C T A C T G A C G T A G T C A G T A C A T G C C G T A C T A G C T A G
Reverse Opposite:
G A T C A G T C A C G T A T C G A C T G C A G T A C G T G A C T C G A T C G T A C G T A A T C G A G C T A G T C G A C T G T A C
p-value:1e-11
log p-value:-2.578e+01
Information Content per bp:1.766
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.5 +/- 27.1bp
Average Position of motif in Background83.1 +/- 7.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GAGACTTAAAAMCARG
-CGGTTTCAAA-----
 A C T G C T G A A C T G T C G A A T G C A C G T A C G T G C T A C T G A C G T A G T C A G T A C A T G C C G T A C T A G C T A G
A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GAGACTTAAAAMCARG
---NATTCAAAT----
 A C T G C T G A A C T G T C G A A T G C A C G T A C G T G C T A C T G A C G T A G T C A G T A C A T G C C G T A C T A G C T A G
A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GAGACTTAAAAMCARG
TTGACTTTT-------
 A C T G C T G A A C T G T C G A A T G C A C G T A C G T G C T A C T G A C G T A G T C A G T A C A T G C C G T A C T A G C T A G
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:4
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GAGACTTAAAAMCARG
-AGTCGTAAAAA----
 A C T G C T G A A C T G T C G A A T G C A C G T A C G T G C T A C T G A C G T A G T C A G T A C A T G C C G T A C T A G C T A G
A C G T T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GAGACTTAAAAMCARG
---ACATCAAAGG---
 A C T G C T G A A C T G T C G A A T G C A C G T A C G T G C T A C T G A C G T A G T C A G T A C A T G C C G T A C T A G C T A G
A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:6
Score:0.49
Offset:3
Orientation:forward strand
Alignment:GAGACTTAAAAMCARG
---ACWTCAAAGG---
 A C T G C T G A A C T G T C G A A T G C A C G T A C G T G C T A C T G A C G T A G T C A G T A C A T G C C G T A C T A G C T A G
A C G T A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:7
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GAGACTTAAAAMCARG
-AAAGATCAAAGGAA-
 A C T G C T G A A C T G T C G A A T G C A C G T A C G T G C T A C T G A C G T A G T C A G T A C A T G C C G T A C T A G C T A G
A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---GAGACTTAAAAMCARG-
AADGAGVCANYASTACAGNC
 A C G T A C G T A C G T A C T G C T G A A C T G T C G A A T G C A C G T A C G T G C T A C T G A C G T A G T C A G T A C A T G C C G T A C T A G C T A G A C G T
G C T A T C G A C G A T C T A G C T G A C A T G T A G C G T A C C T G A C A T G G A T C G C T A T A G C G A C T C T G A A T G C T G C A C T A G C T G A G A T C

HOXC11/MA0651.1/Jaspar

Match Rank:9
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GAGACTTAAAAMCARG
-GGTCGTAAAAT----
 A C T G C T G A A C T G T C G A A T G C A C G T A C G T G C T A C T G A C G T A G T C A G T A C A T G C C G T A C T A G C T A G
A C G T C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T A C G T A C G T A C G T A C G T

HOXC12/MA0906.1/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GAGACTTAAAAMCARG
-GGTCGTAAAAA----
 A C T G C T G A A C T G T C G A A T G C A C G T A C G T G C T A C T G A C G T A G T C A G T A C A T G C C G T A C T A G C T A G
A C G T C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A A C G T A C G T A C G T A C G T