Information for 24-CTGCTATTCTATG (Motif 34)

A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A G T C A C G T C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T C G T A A C T G C G T A C G T A A C G T C G T A A C T G A G T C C G T A A C T G
p-value:1e-6
log p-value:-1.427e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.3 +/- 30.3bp
Average Position of motif in Background62.5 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CTGCTATTCTATG
---CTATTTTTGG
 A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A G T C A C G T C G T A A C G T A C T G
A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:2
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CTGCTATTCTATG-----
---CCATTGTATGCAAAT
 A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A G T C A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

MEF2C/MA0497.1/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGCTATTCTATG---
-TTCTATTTTTAGNNN
 A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A G T C A C G T C G T A A C G T A C T G A C G T A C G T A C G T
A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTGCTATTCTATG-
--GCTATTTTTGGM
 A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A G T C A C G T C G T A A C G T A C T G A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTGCTATTCTATG-
--KCTATTTTTRGH
 A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A G T C A C G T C G T A A C G T A C T G A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CTGCTATTCTATG-
--GCTATTTTTAGC
 A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A G T C A C G T C G T A A C G T A C T G A C G T
A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTGCTATTCTATG
-TKCTGTTCCA--
 A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A G T C A C G T C G T A A C G T A C T G
A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CTGCTATTCTATG
NNNTGTTGTTGTTNG
 A C G T A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A G T C A C G T C G T A A C G T A C T G
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

MEF2B/MA0660.1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CTGCTATTCTATG-
--GCTATTTATAGC
 A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A G T C A C G T C G T A A C G T A C T G A C G T
A C G T A C G T C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

PB0106.1_Arid5a_2/Jaspar

Match Rank:10
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTATTCTATG
TNNTTTCGTATTNNANN
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A G T C A C G T C G T A A C G T A C T G
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G