Information for 21-GGAGTTGGGACAA (Motif 29)

C T A G C T A G C T G A C T A G A G C T A C G T C T A G A C T G T C A G C T G A A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T T A C G A G C T A G T C A G T C A G T C C G T A C T G A A G T C A G C T A G T C A G T C
p-value:1e-7
log p-value:-1.732e+01
Information Content per bp:1.751
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif89.0
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets51.6 +/- 24.3bp
Average Position of motif in Background48.5 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GGAGTTGGGACAA
--GGTTGGCAT--
 C T A G C T A G C T G A C T A G A G C T A C G T C T A G A C T G T C A G C T G A A G T C C G T A C G T A
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T

PB0107.1_Ascl2_2/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GGAGTTGGGACAA
NATNGGGNGGGGANAN
 A C G T A C G T A C G T C T A G C T A G C T G A C T A G A G C T A C G T C T A G A C T G T C A G C T G A A G T C C G T A C G T A
C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGAGTTGGGACAA-
NGTAGGTTGGCATNNN
 A C G T A C G T C T A G C T A G C T G A C T A G A G C T A C G T C T A G A C T G T C A G C T G A A G T C C G T A C G T A A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GGAGTTGGGACAA
--NNTTGGCANN-
 C T A G C T A G C T G A C T A G A G C T A C G T C T A G A C T G T C A G C T G A A G T C C G T A C G T A
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GGAGTTGGGACAA---
------GGGAGGACNG
 C T A G C T A G C T G A C T A G A G C T A C G T C T A G A C T G T C A G C T G A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

PB0157.1_Rara_2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGAGTTGGGACAA---
AGAGCGGGGTCAAGTA
 C T A G C T A G C T G A C T A G A G C T A C G T C T A G A C T G T C A G C T G A A G T C C G T A C G T A A C G T A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GGAGTTGGGACAA
---CSTGGGAAAD
 C T A G C T A G C T G A C T A G A G C T A C G T C T A G A C T G T C A G C T G A A G T C C G T A C G T A
A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GGAGTTGGGACAA
----TTGGCA---
 C T A G C T A G C T G A C T A G A G C T A C G T C T A G A C T G T C A G C T G A A G T C C G T A C G T A
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GGAGTTGGGACAA
---NTTGGCANN-
 C T A G C T A G C T G A C T A G A G C T A C G T C T A G A C T G T C A G C T G A A G T C C G T A C G T A
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

SP2/MA0516.1/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GGAGTTGGGACAA
GGGNGGGGGCGGGGC--
 A C G T A C G T A C G T A C G T C T A G C T A G C T G A C T A G A G C T A C G T C T A G A C T G T C A G C T G A A G T C C G T A C G T A
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T