Information for 14-GCTAATCACT (Motif 27)

A C T G A G T C A C G T C G T A C G T A A C G T A G T C C G T A A T G C A G C T
Reverse Opposite:
C T G A A T C G A C G T A C T G C G T A A C G T A C G T C G T A A C T G A G T C
p-value:1e-7
log p-value:-1.759e+01
Information Content per bp:1.934
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets75.3 +/- 22.6bp
Average Position of motif in Background46.3 +/- 12.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EVX1/MA0887.1/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:GCTAATCACT
GNTAATTANN
 A C T G A G T C A C G T C G T A C G T A A C G T A G T C C G T A A T G C A G C T
A T C G T A G C G A C T C T G A T G C A A G C T A G C T C T G A A T G C A G T C

EVX2/MA0888.1/Jaspar

Match Rank:2
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:GCTAATCACT
NNTAATTANN
 A C T G A G T C A C G T C G T A C G T A A C G T A G T C C G T A A T G C A G C T
T A C G A T G C G A C T T C G A T G C A A G C T A C G T C T G A A T G C A T G C

GSC/MA0648.1/Jaspar

Match Rank:3
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GCTAATCACT
GCTAATCCCC
 A C T G A G T C A C G T C G T A C G T A A C G T A G T C C G T A A T G C A G C T
T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:4
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GCTAATCACT
GCTAATCC--
 A C T G A G T C A C G T C G T A C G T A A C G T A G T C C G T A A T G C A G C T
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T

LHX6/MA0658.1/Jaspar

Match Rank:5
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCTAATCACT
ACTAATTAGC
 A C T G A G T C A C G T C G T A C G T A A C G T A G T C C G T A A T G C A G C T
T C G A A G T C A G C T T C G A G T C A A G C T A G C T C T G A T C A G A G T C

PH0097.1_Lhx6_2/Jaspar

Match Rank:6
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----GCTAATCACT---
NNNCGCTAATTAGNNGA
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C G T A A C G T A G T C C G T A A T G C A G C T A C G T A C G T A C G T
T G C A G C T A G A T C G T A C T C A G G A T C G A C T T C G A C T G A A G C T A G C T C T G A C T A G A G C T C A T G A C T G C G T A

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:7
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GCTAATCACT
-YTAATCCY-
 A C T G A G T C A C G T C G T A C G T A A C G T A G T C C G T A A T G C A G C T
A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:8
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----GCTAATCACT--
GNNAGCTAATCCCCCN
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C G T A A C G T A G T C C G T A A T G C A G C T A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

EMX1/MA0612.1/Jaspar

Match Rank:9
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCTAATCACT
CCTAATTACC
 A C T G A G T C A C G T C G T A C G T A A C G T A G T C C G T A A T G C A G C T
T G A C A G T C G A C T T C G A C G T A C G A T C A G T C T G A T A G C A G T C

PH0081.1_Pdx1/Jaspar

Match Rank:10
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----GCTAATCACT--
NTGNGCTAATTACCNN
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C G T A A C G T A G T C C G T A A T G C A G C T A C G T A C G T
G T C A G A C T A T C G C G T A C T A G A T G C G A C T T G C A G C T A C A G T A C G T C T G A T A G C G A T C A C G T A C G T