Information for 19-GTTTGNTNWCCTC (Motif 26)

A C T G A G C T A C G T G C A T A T C G C T A G G A C T A C G T C G A T G A T C G T A C C A G T A G T C
Reverse Opposite:
T C A G G T C A C A T G C T A G G C T A T G A C C T G A G A C T T A G C C G T A G T C A C T G A T G A C
p-value:1e-7
log p-value:-1.764e+01
Information Content per bp:1.701
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.81%
Number of Background Sequences with motif297.1
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets52.4 +/- 23.9bp
Average Position of motif in Background51.1 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0012.1_Cdx1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GTTTGNTNWCCTC-
NAATTTTATTACCTNN
 A C G T A C G T A C T G A G C T A C G T G C A T A T C G C T A G G A C T A C G T C G A T G A T C G T A C C A G T A G T C A C G T
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A

Foxk1/MA0852.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GTTTGNTNWCCTC--
NNNTTTGTTTACATTTN
 A C G T A C G T A C T G A G C T A C G T G C A T A T C G C T A G G A C T A C G T C G A T G A T C G T A C C A G T A G T C A C G T A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

PB0018.1_Foxk1_1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GTTTGNTNWCCTC--
NNNTTTGTTTACATTTN
 A C G T A C G T A C T G A G C T A C G T G C A T A T C G C T A G G A C T A C G T C G A T G A T C G T A C C A G T A G T C A C G T A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

Foxj3/MA0851.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTTTGNTNWCCTC--
NNNTTTGTTTACNTTNN
 A C G T A C G T A C T G A G C T A C G T G C A T A T C G C T A G G A C T A C G T C G A T G A T C G T A C C A G T A G T C A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTTTGNTNWCCTC--
NNNTTTGTTTACNTTNN
 A C G T A C G T A C T G A G C T A C G T G C A T A T C G C T A G G A C T A C G T C G A T G A T C G T A C C A G T A G T C A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PH0013.1_Cdx2/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTTTGNTNWCCTC-
NAATTTTATTACCNNN
 A C G T A C G T A C T G A G C T A C G T G C A T A T C G C T A G G A C T A C G T C G A T G A T C G T A C C A G T A G T C A C G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:GTTTGNTNWCCTC-
------TGACCTYA
 A C T G A G C T A C G T G C A T A T C G C T A G G A C T A C G T C G A T G A T C G T A C C A G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

FOXP1/MA0481.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTTTGNTNWCCTC--
CTTTGTTTACTTTTN
 A C T G A G C T A C G T G C A T A T C G C T A G G A C T A C G T C G A T G A T C G T A C C A G T A G T C A C G T A C G T
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

PH0046.1_Hoxa10/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTTTGNTNWCCTC
TNAATTTTATTACCTN
 A C G T A C G T A C G T A C T G A G C T A C G T G C A T A T C G C T A G G A C T A C G T C G A T G A T C G T A C C A G T A G T C
G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A

PH0073.1_Hoxc9/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTTTGNTNWCCTC-
NNAATTAATGACCNNN
 A C G T A C G T A C T G A G C T A C G T G C A T A T C G C T A G G A C T A C G T C G A T G A T C G T A C C A G T A G T C A C G T
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C