Information for 7-TSSTGWSWGMCTCARA (Motif 8)

A C G T A T C G T A G C A C G T C T A G C G A T A T C G C G T A A T C G G T A C A T G C C G A T T A G C C G T A C T G A C G T A
Reverse Opposite:
C G A T A G C T A C G T A C T G C G T A A T C G A C T G A T G C C G A T T A G C C G T A A G T C C G T A A T C G A T G C C G T A
p-value:1e-11
log p-value:-2.751e+01
Information Content per bp:1.803
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.5 +/- 23.8bp
Average Position of motif in Background19.5 +/- 7.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOS::JUN/MA0099.2/Jaspar

Match Rank:1
Score:0.58
Offset:7
Orientation:forward strand
Alignment:TSSTGWSWGMCTCARA
-------TGACTCA--
 A C G T A T C G T A G C A C G T C T A G C G A T A T C G C G T A A T C G G T A C A T G C C G A T T A G C C G T A C T G A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TSSTGWSWGMCTCARA
AGGTGHCAGACA----
 A C G T A T C G T A G C A C G T C T A G C G A T A T C G C G T A A T C G G T A C A T G C C G A T T A G C C G T A C T G A C G T A
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T

JUNB/MA0490.1/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TSSTGWSWGMCTCARA
----GGATGACTCAT-
 A C G T A T C G T A G C A C G T C T A G C G A T A T C G C G T A A T C G G T A C A T G C C G A T T A G C C G T A C T G A C G T A
A C G T A C G T A C G T A C G T C A T G C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A C G T A C G T

FOSL2/MA0478.1/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TSSTGWSWGMCTCARA
----GGATGACTCAT-
 A C G T A T C G T A G C A C G T C T A G C G A T A T C G C G T A A T C G G T A C A T G C C G A T T A G C C G T A C T G A C G T A
A C G T A C G T A C G T A C G T A C T G T C A G C T G A A C G T A C T G T C G A A T G C A C G T G T A C C G T A A C G T A C G T

PH0014.1_Cphx/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TSSTGWSWGMCTCARA
--ATGATCGAATCAAA
 A C G T A T C G T A G C A C G T C T A G C G A T A T C G C G T A A T C G G T A C A T G C C G A T T A G C C G T A C T G A C G T A
A C G T A C G T C T G A C G A T T C A G C G T A C A G T A T G C T A C G T G C A G T C A G A C T A G T C C G T A T C G A G C T A

FOSL1/MA0477.1/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TSSTGWSWGMCTCARA
-----GGTGACTCATG
 A C G T A T C G T A G C A C G T C T A G C G A T A T C G C G T A A T C G G T A C A T G C C G A T T A G C C G T A C T G A C G T A
A C G T A C G T A C G T A C G T A C G T C T A G T C A G A C G T A C T G C G T A T A G C A C G T G T A C C G T A A C G T T A C G

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TSSTGWSWGMCTCARA
AGGTGNCAGACAG---
 A C G T A T C G T A G C A C G T C T A G C G A T A T C G C G T A A T C G G T A C A T G C C G A T T A G C C G T A C T G A C G T A
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TSSTGWSWGMCTCARA
-VBTGWCAGCB-----
 A C G T A T C G T A G C A C G T C T A G C G A T A T C G C G T A A T C G G T A C A T G C C G A T T A G C C G T A C T G A C G T A
A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TSSTGWSWGMCTCARA
------ATGACTCATC
 A C G T A T C G T A G C A C G T C T A G C G A T A T C G C G T A A T C G G T A C A T G C C G A T T A G C C G T A C T G A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C G T C A T G G C T A T A G C C G A T G T A C G C T A A C G T A T G C

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:10
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:TSSTGWSWGMCTCARA
------ATGASTCATH
 A C G T A T C G T A G C A C G T C T A G C G A T A T C G C G T A A T C G G T A C A T G C C G A T T A G C C G T A C T G A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C G T A C T G C G T A T A G C C G A T G T A C C G T A A C G T G T C A