Information for 14-AGCACMTAAG (Motif 33)

C G T A A C T G A G T C C G T A A G T C G T C A A C G T C G T A C G T A A C T G
Reverse Opposite:
A G T C C G A T A C G T C G T A A C G T A C T G A C G T C T A G A G T C A C G T
p-value:1e-6
log p-value:-1.393e+01
Information Content per bp:1.902
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif32.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets56.1 +/- 17.3bp
Average Position of motif in Background48.9 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---AGCACMTAAG---
CGAAGCACACAAAATA
 A C G T A C G T A C G T C G T A A C T G A G T C C G T A A G T C G T C A A C G T C G T A C G T A A C T G A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AGCACMTAAG
AAGCACTTAA-
 A C G T C G T A A C T G A G T C C G T A A G T C G T C A A C G T C G T A C G T A A C T G
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T

Twist2/MA0633.1/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AGCACMTAAG--
--NACATATGGN
 C G T A A C T G A G T C C G T A A G T C G T C A A C G T C G T A C G T A A C T G A C G T A C G T
A C G T A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T

Bhlha15/MA0607.1/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:AGCACMTAAG-
---ACATATGG
 C G T A A C T G A G T C C G T A A G T C G T C A A C G T C G T A C G T A A C T G A C G T
A C G T A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G

PH0112.1_Nkx2-3/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----AGCACMTAAG-
CNTTAAGTACTTAANG
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A A G T C G T C A A C G T C G T A C G T A A C T G A C G T
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

NKX3-2/MA0122.2/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGCACMTAAG
ACCACTTAA-
 C G T A A C T G A G T C C G T A A G T C G T C A A C G T C G T A C G T A A C T G
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGCACMTAAG
ACCACTTAA-
 C G T A A C T G A G T C C G T A A G T C G T C A A C G T C G T A C G T A A C T G
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T

ISL2/MA0914.1/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGCACMTAAG
-GCACTTAA-
 C G T A A C T G A G T C C G T A A G T C G T C A A C G T C G T A C G T A A C T G
A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----AGCACMTAAG---
CATAACCACTTAACAAC
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A A G T C G T C A A C G T C G T A C G T A A C T G A C G T A C G T A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGCACMTAAG
-GCACGTAY-
 C G T A A C T G A G T C C G T A A G T C G T C A A C G T C G T A C G T A A C T G
A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T