Information for 3-TTGGVATGAGCACAGC (Motif 3)

A C G T C A G T C A T G A T C G T A C G G T C A C G A T A T C G C G T A C A T G A G T C C G T A A G T C C G T A A T C G A G T C
Reverse Opposite:
A C T G A T G C C G A T T C A G A C G T A C T G G A T C A C G T A T G C C G T A A C G T A T C G T A G C G T A C G T C A T C G A
p-value:1e-16
log p-value:-3.851e+01
Information Content per bp:1.708
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.2 +/- 29.3bp
Average Position of motif in Background68.3 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TTGGVATGAGCACAGC---
--NNNNTGAGCACTGTNNG
 A C G T C A G T C A T G A T C G T A C G G T C A C G A T A T C G C G T A C A T G A G T C C G T A A G T C C G T A A T C G A G T C A C G T A C G T A C G T
A C G T A C G T G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.55
Offset:7
Orientation:forward strand
Alignment:TTGGVATGAGCACAGC------
-------GAGCACAGCAGGACA
 A C G T C A G T C A T G A T C G T A C G G T C A C G A T A T C G C G T A C A T G A G T C C G T A A G T C C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TTGGVATGAGCACAGC--
-NNGTATGTGCACATNNN
 A C G T C A G T C A T G A T C G T A C G G T C A C G A T A T C G C G T A C A T G A G T C C G T A A G T C C G T A A T C G A G T C A C G T A C G T
A C G T C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:TTGGVATGAGCACAGC
------AAACCACAGC
 A C G T C A G T C A T G A T C G T A C G G T C A C G A T A T C G C G T A C A T G A G T C C G T A A G T C C G T A A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.53
Offset:5
Orientation:forward strand
Alignment:TTGGVATGAGCACAGC-
-----ATGACGTCATCN
 A C G T C A G T C A T G A T C G T A C G G T C A C G A T A T C G C G T A C A T G A G T C C G T A A G T C C G T A A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T A G T C G A T C

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TTGGVATGAGCACAGC
GTGGCGTGACNG----
 A C G T C A G T C A T G A T C G T A C G G T C A C G A T A T C G C G T A C A T G A G T C C G T A A G T C C G T A A T C G A G T C
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G A C G T A C G T A C G T A C G T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:7
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:TTGGVATGAGCACAGC-
-----ATGACGTCAYYN
 A C G T C A G T C A T G A T C G T A C G G T C A C G A T A T C G C G T A C A T G A G T C C G T A A G T C C G T A A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G C A T A C T G C T G A A G T C T C A G G C A T T G A C C G T A A G C T A G T C T A C G

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.51
Offset:12
Orientation:forward strand
Alignment:TTGGVATGAGCACAGC-
------------CAGCC
 A C G T C A G T C A T G A T C G T A C G G T C A C G A T A T C G C G T A C A T G A G T C C G T A A G T C C G T A A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.51
Offset:10
Orientation:reverse strand
Alignment:TTGGVATGAGCACAGC
----------CACAGN
 A C G T C A G T C A T G A T C G T A C G G T C A C G A T A T C G C G T A C A T G A G T C C G T A A G T C C G T A A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TTGGVATGAGCACAGC
ATGGGGTGAT------
 A C G T C A G T C A T G A T C G T A C G G T C A C G A T A T C G C G T A C A T G A G T C C G T A A G T C C G T A A T C G A G T C
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T