Information for 14-GGCCAAGAGGCAA (Motif 22)

A C T G A C T G A T G C A G T C C G T A C G T A A C T G C T G A A C T G C T A G A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A G T C A G T C A G C T A G T C A C G T A C G T C T A G A T C G A G T C A G T C
p-value:1e-9
log p-value:-2.223e+01
Information Content per bp:1.922
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.8 +/- 22.3bp
Average Position of motif in Background78.5 +/- 10.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGCCAAGAGGCAA
TAGGGCAAAGGTCA-
 A C G T A C G T A C T G A C T G A T G C A G T C C G T A C G T A A C T G C T G A A C T G C T A G A G T C C G T A C G T A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGCCAAGAGGCAA
GTAGGGCAAAGGTCA-
 A C G T A C G T A C G T A C T G A C T G A T G C A G T C C G T A C G T A A C T G C T G A A C T G C T A G A G T C C G T A C G T A
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGCCAAGAGGCAA
GAGGTCAAAAGGTCA
 A C G T A C G T A C T G A C T G A T G C A G T C C G T A C G T A A C T G C T G A A C T G C T A G A G T C C G T A C G T A
T C A G C T G A A C T G C T A G A C G T A G T C G T C A C G T A C T G A C G T A A C T G A C T G C G A T A G T C C T G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGCCAAGAGGCAA
TGGGGCAAAGGTCA-
 A C G T A C G T A C T G A C T G A T G C A G T C C G T A C G T A A C T G C T G A A C T G C T A G A G T C C G T A C G T A
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGCCAAGAGGCAA
CCGCCCAAGGGCAG
 A C G T A C T G A C T G A T G C A G T C C G T A C G T A A C T G C T G A A C T G C T A G A G T C C G T A C G T A
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGCCAAGAGGCAA-
AAAGGTCAAAGGTCAAC
 A C G T A C G T A C G T A C T G A C T G A T G C A G T C C G T A C G T A A C T G C T G A A C T G C T A G A G T C C G T A C G T A A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C

Rarb/MA0857.1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GGCCAAGAGGCAA
AAAGGTCAAAAGGTCA
 A C G T A C G T A C G T A C T G A C T G A T G C A G T C C G T A C G T A A C T G C T G A A C T G C T A G A G T C C G T A C G T A
G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A

Rarg/MA0859.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGCCAAGAGGCAA-
AAGGTCAAAAGGTCAA
 A C G T A C G T A C T G A C T G A T G C A G T C C G T A C G T A A C T G C T G A A C T G C T A G A G T C C G T A C G T A A C G T
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GGCCAAGAGGCAA----
------AAGGCAAGTGT
 A C T G A C T G A T G C A G T C C G T A C G T A A C T G C T G A A C T G C T A G A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

PB0147.1_Max_2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGCCAAGAGGCAA
GTGCCACGCGACTG
 A C G T A C T G A C T G A T G C A G T C C G T A C G T A A C T G C T G A A C T G C T A G A G T C C G T A C G T A
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G