Information for 8-CATTAAGCCT (Motif 21)

T G A C C G T A A C G T A C G T T C G A C G T A C A T G A G T C A G T C A G C T
Reverse Opposite:
C T G A A C T G A C T G G T A C A C G T A G C T C G T A G T C A C G A T A C T G
p-value:1e-10
log p-value:-2.356e+01
Information Content per bp:1.850
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.77%
Number of Background Sequences with motif65.3
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets48.5 +/- 25.0bp
Average Position of motif in Background41.5 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0138.1_Pitx2/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---CATTAAGCCT----
GNNNATTAATCCCTNCN
 A C G T A C G T A C G T T G A C C G T A A C G T A C G T T C G A C G T A C A T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

PH0130.1_Otx2/Jaspar

Match Rank:2
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---CATTAAGCCT----
GANNATTAATCCCTNNN
 A C G T A C G T A C G T T G A C C G T A A C G T A C G T T C G A C G T A C A T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A

PH0129.1_Otx1/Jaspar

Match Rank:3
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---CATTAAGCCT----
NNNAATTAATCCCCNCN
 A C G T A C G T A C G T T G A C C G T A A C G T A C G T T C G A C G T A C A T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.72
Offset:3
Orientation:forward strand
Alignment:CATTAAGCCT-
---TAATCCCN
 T G A C C G T A A C G T A C G T T C G A C G T A C A T G A G T C A G T C A G C T A C G T
A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

Pitx1/MA0682.1/Jaspar

Match Rank:5
Score:0.72
Offset:2
Orientation:forward strand
Alignment:CATTAAGCCT
--TTAATCCC
 T G A C C G T A A C G T A C G T T C G A C G T A C A T G A G T C A G T C A G C T
A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

PITX3/MA0714.1/Jaspar

Match Rank:6
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CATTAAGCCT
-CTTAATCCC
 T G A C C G T A A C G T A C G T T C G A C G T A C A T G A G T C A G T C A G C T
A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

OTX2/MA0712.1/Jaspar

Match Rank:7
Score:0.72
Offset:2
Orientation:forward strand
Alignment:CATTAAGCCT
--TTAATCCT
 T G A C C G T A A C G T A C G T T C G A C G T A C A T G A G T C A G T C A G C T
A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CATTAAGCCT-
-NYTAATCCYB
 T G A C C G T A A C G T A C G T T C G A C G T A C A T G A G T C A G T C A G C T A C G T
A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

Dmbx1/MA0883.1/Jaspar

Match Rank:9
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CATTAAGCCT-----
NNNATTAATCCGNTTNA
 A C G T A C G T T G A C C G T A A C G T A C G T T C G A C G T A C A T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:10
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CATTAAGCCT-----
NNNATTAATCCGNTTNA
 A C G T A C G T T G A C C G T A A C G T A C G T T C G A C G T A C A T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A