Information for 7-TBTGAATAATCCW (Motif 7)

C G A T A T G C A C G T C T A G T G C A G T C A C G A T C G T A C T G A A C G T G A T C G A T C C G T A
Reverse Opposite:
C G A T C T A G C T A G G T C A G A C T A C G T G C T A A C G T A C G T A G T C C G T A T A C G C G T A
p-value:1e-17
log p-value:-4.131e+01
Information Content per bp:1.699
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.82%
Number of Background Sequences with motif84.1
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets47.3 +/- 28.1bp
Average Position of motif in Background50.2 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.74
Offset:1
Orientation:forward strand
Alignment:TBTGAATAATCCW
-ATGAATATTC--
 C G A T A T G C A C G T C T A G T G C A G T C A C G A T C G T A C T G A A C G T G A T C G A T C C G T A
A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:TBTGAATAATCCW
-ATGMATATDC--
 C G A T A T G C A C G T C T A G T G C A G T C A C G A T C G T A C T G A A C G T G A T C G A T C C G T A
A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TBTGAATAATCCW
-ATGCATAATTCA
 C G A T A T G C A C G T C T A G T G C A G T C A C G A T C G T A C T G A A C G T G A T C G A T C C G T A
A C G T G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.68
Offset:6
Orientation:forward strand
Alignment:TBTGAATAATCCW-
------TAATCCCN
 C G A T A T G C A C G T C T A G T G C A G T C A C G A T C G T A C T G A A C G T G A T C G A T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

Pitx1/MA0682.1/Jaspar

Match Rank:5
Score:0.67
Offset:5
Orientation:forward strand
Alignment:TBTGAATAATCCW
-----TTAATCCC
 C G A T A T G C A C G T C T A G T G C A G T C A C G A T C G T A C T G A A C G T G A T C G A T C C G T A
A C G T A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

PITX3/MA0714.1/Jaspar

Match Rank:6
Score:0.67
Offset:4
Orientation:forward strand
Alignment:TBTGAATAATCCW
----CTTAATCCC
 C G A T A T G C A C G T C T A G T G C A G T C A C G A T C G T A C T G A A C G T G A T C G A T C C G T A
A C G T A C G T A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:7
Score:0.67
Offset:4
Orientation:forward strand
Alignment:TBTGAATAATCCW
----GCTAATCC-
 C G A T A T G C A C G T C T A G T G C A G T C A C G A T C G T A C T G A A C G T G A T C G A T C C G T A
A C G T A C G T A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:8
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TBTGAATAATCCW
AAAATATGCATAATAAA
 A C G T A C G T A C G T A C G T C G A T A T G C A C G T C T A G T G C A G T C A C G A T C G T A C T G A A C G T G A T C G A T C C G T A
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.66
Offset:4
Orientation:forward strand
Alignment:TBTGAATAATCCW-
----NYTAATCCYB
 C G A T A T G C A C G T C T A G T G C A G T C A C G A T C G T A C T G A A C G T G A T C G A T C C G T A A C G T
A C G T A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

OTX2/MA0712.1/Jaspar

Match Rank:10
Score:0.66
Offset:5
Orientation:forward strand
Alignment:TBTGAATAATCCW
-----TTAATCCT
 C G A T A T G C A C G T C T A G T G C A G T C A C G A T C G T A C T G A A C G T G A T C G A T C C G T A
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T