Information for 24-AAATAGTTTGGACTTG (Motif 30)

C G T A C G T A C G T A A G C T C G T A A C T G A C G T A C G T A C G T A C T G A C T G T C G A G T A C A C G T A C G T C T A G
Reverse Opposite:
A G T C C G T A C G T A A C T G A C G T A G T C A G T C C G T A C G T A C G T A A G T C C G A T C T G A A C G T A C G T A C G T
p-value:1e-8
log p-value:-1.986e+01
Information Content per bp:1.887
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.8 +/- 27.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0165.1_Sox11_2/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAATAGTTTGGACTTG
AAAATTGTTATGAA---
 A C G T C G T A C G T A C G T A A G C T C G T A A C T G A C G T A C G T A C G T A C T G A C T G T C G A G T A C A C G T A C G T C T A G
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A A C G T A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AAATAGTTTGGACTTG
GGAAAAATTGTTAGGAA---
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A G C T C G T A A C T G A C G T A C G T A C G T A C T G A C T G T C G A G T A C A C G T A C G T C T A G
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AAATAGTTTGGACTTG----
----NNATTGGACTTTNGNN
 C G T A C G T A C G T A A G C T C G T A A C T G A C G T A C G T A C G T A C T G A C T G T C G A G T A C A C G T A C G T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:AAATAGTTTGGACTTG
------BNTGDCCTTG
 C G T A C G T A C G T A A G C T C G T A A C T G A C G T A C G T A C G T A C T G A C T G T C G A G T A C A C G T A C G T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AAATAGTTTGGACTTG
NTAATKGTTT-------
 A C G T C G T A C G T A C G T A A G C T C G T A A C T G A C G T A C G T A C G T A C T G A C T G T C G A G T A C A C G T A C G T C T A G
A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AAATAGTTTGGACTTG
--ATTGTTA-------
 C G T A C G T A C G T A A G C T C G T A A C T G A C G T A C G T A C G T A C T G A C T G T C G A G T A C A C G T A C G T C T A G
A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----AAATAGTTTGGACTTG
CCAAAAATAG----------
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A G C T C G T A A C T G A C G T A C G T A C G T A C T G A C T G T C G A G T A C A C G T A C G T C T A G
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:AAATAGTTTGGACTTG--
--------TGACCTTGAN
 C G T A C G T A C G T A A G C T C G T A A C T G A C G T A C G T A C G T A C T G A C T G T C G A G T A C A C G T A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:AAATAGTTTGGACTTG--
--------TGACCTTGAV
 C G T A C G T A C G T A A G C T C G T A A C T G A C G T A C G T A C G T A C T G A C T G T C G A G T A C A C G T A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

PB0035.1_Irf5_1/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:AAATAGTTTGGACTTG-
--NTGGTTTCGGTTNNN
 C G T A C G T A C G T A A G C T C G T A A C T G A C G T A C G T A C G T A C T G A C T G T C G A G T A C A C G T A C G T C T A G A C G T
A C G T A C G T A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T