Information for 22-CAGAGGGTGGRAACCC (Motif 25)

A G T C C G T A A T C G C G T A A T C G A T C G A T C G A C G T A C T G T C A G C T A G C T G A C G T A G T A C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G C G A T A G C T A G T C A G T C G T A C C G T A T A G C T A G C A T G C G C A T A T G C A C G T C T A G
p-value:1e-9
log p-value:-2.092e+01
Information Content per bp:1.762
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.0 +/- 22.4bp
Average Position of motif in Background37.5 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:1
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CAGAGGGTGGRAACCC
----AGATGCAATCCC
 A G T C C G T A A T C G C G T A A T C G A T C G A T C G A C G T A C T G T C A G C T A G C T G A C G T A G T A C A G T C A G T C
A C G T A C G T A C G T A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CAGAGGGTGGRAACCC
-----CSTGGGAAAD-
 A G T C C G T A A T C G C G T A A T C G A T C G A T C G A C G T A C T G T C A G C T A G C T G A C G T A G T A C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.50
Offset:8
Orientation:reverse strand
Alignment:CAGAGGGTGGRAACCC--
--------GGAAATCCCC
 A G T C C G T A A T C G C G T A A T C G A T C G A T C G A C G T A C T G T C A G C T A G C T G A C G T A G T A C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:4
Score:0.49
Offset:5
Orientation:forward strand
Alignment:CAGAGGGTGGRAACCC-
-----GGGGGAATCCCC
 A G T C C G T A A T C G C G T A A T C G A T C G A T C G A C G T A C T G T C A G C T A G C T G A C G T A G T A C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:CAGAGGGTGGRAACCC--
--------GGAAANCCCC
 A G T C C G T A A T C G C G T A A T C G A T C G A T C G A C G T A C T G T C A G C T A G C T G A C G T A G T A C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:6
Score:0.49
Offset:3
Orientation:forward strand
Alignment:CAGAGGGTGGRAACCC
---AAGGTGTKAA---
 A G T C C G T A A T C G C G T A A T C G A T C G A T C G A C G T A C T G T C A G C T A G C T G A C G T A G T A C A G T C A G T C
A C G T A C G T A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:7
Score:0.48
Offset:7
Orientation:reverse strand
Alignment:CAGAGGGTGGRAACCC---
-------GGGAAATCCCCN
 A G T C C G T A A T C G C G T A A T C G A T C G A T C G A C G T A C T G T C A G C T A G C T G A C G T A G T A C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.47
Offset:8
Orientation:reverse strand
Alignment:CAGAGGGTGGRAACCC--
--------GGAAATTCCC
 A G T C C G T A A T C G C G T A A T C G A T C G A T C G A C G T A C T G T C A G C T A G C T G A C G T A G T A C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:9
Score:0.46
Offset:6
Orientation:reverse strand
Alignment:CAGAGGGTGGRAACCC
------TTTGAAACCG
 A G T C C G T A A T C G C G T A A T C G A T C G A T C G A C G T A C T G T C A G C T A G C T G A C G T A G T A C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.46
Offset:5
Orientation:reverse strand
Alignment:CAGAGGGTGGRAACCC
-----NATGGAAAAN-
 A G T C C G T A A T C G C G T A A T C G A T C G A T C G A C G T A C T G T C A G C T A G C T G A C G T A G T A C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T