Information for 10-AGGAAATTCC (Motif 16)

C G T A C T A G A C T G T C G A T G C A C G T A G A C T A C G T T A G C G A T C
Reverse Opposite:
C T A G A C T G T G C A C T G A G C A T A C G T A G C T T G A C G A T C G C A T
p-value:1e-11
log p-value:-2.674e+01
Information Content per bp:1.664
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif8.47%
Number of Background Sequences with motif1497.8
Percentage of Background Sequences with motif3.12%
Average Position of motif in Targets40.9 +/- 25.8bp
Average Position of motif in Background50.4 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.88
Offset:1
Orientation:forward strand
Alignment:AGGAAATTCC-
-GGAAATTCCC
 C G T A C T A G A C T G T C G A T G C A C G T A G A C T A C G T T A G C G A T C A C G T
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:AGGAAATTCC-
-GGAAATTCCC
 C G T A C T A G A C T G T C G A T G C A C G T A G A C T A C G T T A G C G A T C A C G T
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:AGGAAATTCC-
-GGAAANCCCC
 C G T A C T A G A C T G T C G A T G C A C G T A G A C T A C G T T A G C G A T C A C G T
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:AGGAAATTCC-
-GGAAATCCCC
 C G T A C T A G A C T G T C G A T G C A C G T A G A C T A C G T T A G C G A T C A C G T
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---AGGAAATTCC
NACAGGAAAT---
 A C G T A C G T A C G T C G T A C T A G A C T G T C G A T G C A C G T A G A C T A C G T T A G C G A T C
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:AGGAAATTCC--
GGGAAATCCCCN
 C G T A C T A G A C T G T C G A T G C A C G T A G A C T A C G T T A G C G A T C A C G T A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:AGGAAATTCC---
---GCATTCCAGN
 C G T A C T A G A C T G T C G A T G C A C G T A G A C T A C G T T A G C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G

TEAD4/MA0809.1/Jaspar

Match Rank:8
Score:0.71
Offset:2
Orientation:forward strand
Alignment:AGGAAATTCC--
--CACATTCCAT
 C G T A C T A G A C T G T C G A T G C A C G T A G A C T A C G T T A G C G A T C A C G T A C G T
A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:9
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:AGGAAATTCC---
---RCATTCCWGG
 C G T A C T A G A C T G T C G A T G C A C G T A G A C T A C G T T A G C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AGGAAATTCC
NACAGGAAAT---
 A C G T A C G T A C G T C G T A C T A G A C T G T C G A T G C A C G T A G A C T A C G T T A G C G A T C
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T