Information for 13-TCACATAAGGAAAATG (Motif 15)

A C G T A G T C C T G A A T G C G C T A A G C T C T G A C G T A C T A G A T C G C G T A T G C A C G T A T C G A C G A T A T C G
Reverse Opposite:
A T G C C G T A A G C T A C G T A C G T C G A T A T G C A G T C A C G T A G C T C T G A C G A T T A C G A G C T C T A G C G T A
p-value:1e-11
log p-value:-2.746e+01
Information Content per bp:1.756
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.0 +/- 22.2bp
Average Position of motif in Background60.4 +/- 10.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TCACATAAGGAAAATG
GGTCANYTGAGGWCA---
 A C G T A C G T A C G T A G T C C T G A A T G C G C T A A G C T C T G A C G T A C T A G A T C G C G T A T G C A C G T A T C G A C G A T A T C G
C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A A C G T A C G T A C G T

NFIL3/MA0025.1/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TCACATAAGGAAAATG
ANGTTACATAA--------
 A C G T A C G T A C G T A C G T A G T C C T G A A T G C G C T A A G C T C T G A C G T A C T A G A T C G C G T A T G C A C G T A T C G A C G A T A T C G
C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:3
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------TCACATAAGGAAAATG
NNGAGGTTACTNNAGGTCA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T G A A T G C G C T A A G C T C T G A C G T A C T A G A T C G C G T A T G C A C G T A T C G A C G A T A T C G
T G A C G T C A T C A G T C G A C A T G C A T G A G C T G A C T G C T A G A T C G A C T G A C T A G C T T C G A C T A G C A T G C A G T A G T C T C G A A C G T A C G T A C G T

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TCACATAAGGAAAATG
GGGTTACTANAGGTCA---
 A C G T A C G T A C G T A C G T A G T C C T G A A T G C G C T A A G C T C T G A C G T A C T A G A T C G C G T A T G C A C G T A T C G A C G A T A T C G
C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TCACATAAGGAAAATG
AAACAGACAAAGGAAT--
 A C G T A C G T A C G T A G T C C T G A A T G C G C T A A G C T C T G A C G T A C T A G A T C G C G T A T G C A C G T A T C G A C G A T A T C G
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TCACATAAGGAAAATG
-----TRAGGTCA---
 A C G T A G T C C T G A A T G C G C T A A G C T C T G A C G T A C T A G A T C G C G T A T G C A C G T A T C G A C G A T A T C G
A C G T A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:7
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:TCACATAAGGAAAATG-
-------AAAACAATGG
 A C G T A G T C C T G A A T G C G C T A A G C T C T G A C G T A C T A G A T C G C G T A T G C A C G T A T C G A C G A T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

Rarg(var.2)/MA0860.1/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TCACATAAGGAAAATG
AAGGTCACGAAAGGTCA---
 A C G T A C G T A C G T A C G T A C G T A G T C C T G A A T G C G C T A A G C T C T G A C G T A C T A G A T C G C G T A T G C A C G T A T C G A C G A T A T C G
C T G A T C G A A T C G A C T G A C G T G T A C T C G A G T A C A T C G T C G A T C G A T C G A A C T G A C T G G C A T G A T C T C G A A C G T A C G T A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TCACATAAGGAAAATG
VTTRCATAAY-------
 A C G T A C G T A G T C C T G A A T G C G C T A A G C T C T G A C G T A C T A G A T C G C G T A T G C A C G T A T C G A C G A T A T C G
T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TCACATAAGGAAAATG
-----NATGGAAAAN-
 A C G T A G T C C T G A A T G C G C T A A G C T C T G A C G T A C T A G A T C G C G T A T G C A C G T A T C G A C G A T A T C G
A C G T A C G T A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T