Information for 9-TTWGCTTTTACAAATG (Motif 12)

A G C T A G C T C G T A T C A G G A T C C G A T A G C T G C A T C G A T T G C A G T A C C G T A G T C A T C G A C A G T C T A G
Reverse Opposite:
G A T C G T C A A G C T A C G T C G A T A C T G A C G T G C T A C G T A C T G A G C T A C A T G A G T C C G A T C T G A C T G A
p-value:1e-14
log p-value:-3.299e+01
Information Content per bp:1.643
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.69%
Number of Background Sequences with motif113.9
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets50.4 +/- 21.1bp
Average Position of motif in Background50.8 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TTWGCTTTTACAAATG
-----TTATGCAAAT-
 A G C T A G C T C G T A T C A G G A T C C G A T A G C T G C A T C G A T T G C A G T A C C G T A G T C A T C G A C A G T C T A G
A C G T A C G T A C G T A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:2
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TTWGCTTTTACAAATG
-----TTTTCCA----
 A G C T A G C T C G T A T C A G G A T C C G A T A G C T G C A T C G A T T G C A G T A C C G T A G T C A T C G A C A G T C T A G
A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TTWGCTTTTACAAATG
BTVATTWGCATA--------
 A C G T A C G T A C G T A C G T A G C T A G C T C G T A T C A G G A T C C G A T A G C T G C A T C G A T T G C A G T A C C G T A G T C A T C G A C A G T C T A G
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.53
Offset:5
Orientation:forward strand
Alignment:TTWGCTTTTACAAATG
-----ATATGCAAAT-
 A G C T A G C T C G T A T C A G G A T C C G A T A G C T G C A T C G A T T G C A G T A C C G T A G T C A T C G A C A G T C T A G
A C G T A C G T A C G T A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:5
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TTWGCTTTTACAAATG-
-----TTATGCAAATTA
 A G C T A G C T C G T A T C A G G A T C C G A T A G C T G C A T C G A T T G C A G T A C C G T A G T C A T C G A C A G T C T A G A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A

POU2F2/MA0507.1/Jaspar

Match Rank:6
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:TTWGCTTTTACAAATG--
-----ATATGCAAATNNN
 A G C T A G C T C G T A T C A G G A T C C G A T A G C T G C A T C G A T T G C A G T A C C G T A G T C A T C G A C A G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----TTWGCTTTTACAAATG
CTCATTTGCATW--------
 A C G T A C G T A C G T A C G T A G C T A G C T C G T A T C A G G A T C C G A T A G C T G C A T C G A T T G C A G T A C C G T A G T C A T C G A C A G T C T A G
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:8
Score:0.52
Offset:6
Orientation:forward strand
Alignment:TTWGCTTTTACAAATG
------TATGCAAAT-
 A G C T A G C T C G T A T C A G G A T C C G A T A G C T G C A T C G A T T G C A G T A C C G T A G T C A T C G A C A G T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----TTWGCTTTTACAAATG
NNTGTTTATTTTGGCA----
 A C G T A C G T A C G T A C G T A G C T A G C T C G T A T C A G G A T C C G A T A G C T G C A T C G A T T G C A G T A C C G T A G T C A T C G A C A G T C T A G
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A A C G T A C G T A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:TTWGCTTTTACAAATG
----AATATGCAAATT
 A G C T A G C T C G T A T C A G G A T C C G A T A G C T G C A T C G A T T G C A G T A C C G T A G T C A T C G A C A G T C T A G
A C G T A C G T A C G T A C G T G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T