Information for 8-GCTATTTACA (Motif 11)

A C T G G A T C G C A T C G T A G A C T A G C T A G C T C T G A T G A C G C T A
Reverse Opposite:
C G A T A C T G G A C T C T G A T C G A C T G A G C A T C G T A C T A G T G A C
p-value:1e-14
log p-value:-3.327e+01
Information Content per bp:1.654
Number of Target Sequences with motif81.0
Percentage of Target Sequences with motif10.89%
Number of Background Sequences with motif1959.6
Percentage of Background Sequences with motif4.09%
Average Position of motif in Targets49.4 +/- 25.8bp
Average Position of motif in Background49.4 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXB1/MA0845.1/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:GCTATTTACA--
-ATATTTACATA
 A C T G G A T C G C A T C G T A G A C T A G C T A G C T C T G A T G A C G C T A A C G T A C G T
A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

MEF2B/MA0660.1/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GCTATTTACA--
GCTATTTATAGC
 A C T G G A T C G C A T C G T A G A C T A G C T A G C T C T G A T G A C G C T A A C G T A C G T
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GCTATTTACA--
KCTATTTTTRGH
 A C T G G A T C G C A T C G T A G A C T A G C T A G C T C T G A T G A C G C T A A C G T A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

MEF2D/MA0773.1/Jaspar

Match Rank:4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GCTATTTACA--
TCTATTTATAGN
 A C T G G A T C G C A T C G T A G A C T A G C T A G C T C T G A T G A C G C T A A C G T A C G T
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:5
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCTATTTACA--
GCTATTTTTAGC
 A C T G G A T C G C A T C G T A G A C T A G C T A G C T C T G A T G A C G C T A A C G T A C G T
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:6
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GCTATTTACA----
BSNTGTTTACWYWGN
 A C G T A C T G G A T C G C A T C G T A G A C T A G C T A G C T C T G A T G A C G C T A A C G T A C G T A C G T A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:7
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GCTATTTACA--
CNTGTTTACATA
 A C T G G A T C G C A T C G T A G A C T A G C T A G C T C T G A T G A C G C T A A C G T A C G T
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GCTATTTACA-
-CTATTTTTGG
 A C T G G A T C G C A T C G T A G A C T A G C T A G C T C T G A T G A C G C T A A C G T
A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:9
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GCTATTTACA--
GCTATTTTTGGM
 A C T G G A T C G C A T C G T A G A C T A G C T A G C T C T G A T G A C G C T A A C G T A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

FOXD2/MA0847.1/Jaspar

Match Rank:10
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GCTATTTACA
--TGTTTAC-
 A C T G G A T C G C A T C G T A G A C T A G C T A G C T C T G A T G A C G C T A
A C G T A C G T G A C T T C A G C G A T C A G T C A G T C T G A A G T C A C G T