Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-57 | -1.327e+02 | 0.0000 | 232.0 | 31.31% | 4690.1 | 9.87% | motif file (matrix) |
svg |
2 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-55 | -1.282e+02 | 0.0000 | 79.0 | 10.66% | 436.5 | 0.92% | motif file (matrix) |
svg |
3 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-48 | -1.118e+02 | 0.0000 | 145.0 | 19.57% | 2176.3 | 4.58% | motif file (matrix) |
svg |
4 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-47 | -1.104e+02 | 0.0000 | 135.0 | 18.22% | 1903.1 | 4.01% | motif file (matrix) |
svg |
5 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-43 | -9.960e+01 | 0.0000 | 141.0 | 19.03% | 2291.8 | 4.82% | motif file (matrix) |
svg |
6 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-41 | -9.540e+01 | 0.0000 | 192.0 | 25.91% | 4209.1 | 8.86% | motif file (matrix) |
svg |
7 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-40 | -9.238e+01 | 0.0000 | 104.0 | 14.04% | 1330.9 | 2.80% | motif file (matrix) |
svg |
8 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-39 | -8.997e+01 | 0.0000 | 92.0 | 12.42% | 1054.0 | 2.22% | motif file (matrix) |
svg |
9 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-39 | -8.981e+01 | 0.0000 | 146.0 | 19.70% | 2675.8 | 5.63% | motif file (matrix) |
svg |
10 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-34 | -7.900e+01 | 0.0000 | 182.0 | 24.56% | 4341.0 | 9.14% | motif file (matrix) |
svg |
11 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-29 | -6.783e+01 | 0.0000 | 85.0 | 11.47% | 1209.5 | 2.55% | motif file (matrix) |
svg |
12 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-28 | -6.637e+01 | 0.0000 | 100.0 | 13.50% | 1693.5 | 3.56% | motif file (matrix) |
svg |
13 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-28 | -6.588e+01 | 0.0000 | 103.0 | 13.90% | 1801.3 | 3.79% | motif file (matrix) |
svg |
14 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-22 | -5.200e+01 | 0.0000 | 100.0 | 13.50% | 2055.3 | 4.33% | motif file (matrix) |
svg |
15 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-18 | -4.371e+01 | 0.0000 | 72.0 | 9.72% | 1310.3 | 2.76% | motif file (matrix) |
svg |
16 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-16 | -3.824e+01 | 0.0000 | 63.0 | 8.50% | 1148.4 | 2.42% | motif file (matrix) |
svg |
17 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-15 | -3.617e+01 | 0.0000 | 50.0 | 6.75% | 785.0 | 1.65% | motif file (matrix) |
svg |
18 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-13 | -3.109e+01 | 0.0000 | 81.0 | 10.93% | 2031.6 | 4.28% | motif file (matrix) |
svg |
19 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-11 | -2.590e+01 | 0.0000 | 71.0 | 9.58% | 1837.2 | 3.87% | motif file (matrix) |
svg |
20 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-10 | -2.358e+01 | 0.0000 | 92.0 | 12.42% | 2849.5 | 6.00% | motif file (matrix) |
svg |
21 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-9 | -2.137e+01 | 0.0000 | 75.0 | 10.12% | 2213.6 | 4.66% | motif file (matrix) |
svg |
22 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-8 | -2.016e+01 | 0.0000 | 86.0 | 11.61% | 2773.3 | 5.84% | motif file (matrix) |
svg |
23 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-8 | -1.968e+01 | 0.0000 | 39.0 | 5.26% | 834.0 | 1.76% | motif file (matrix) |
svg |
24 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-7 | -1.622e+01 | 0.0000 | 266.0 | 35.90% | 12859.6 | 27.07% | motif file (matrix) |
svg |
25 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-7 | -1.620e+01 | 0.0000 | 40.0 | 5.40% | 991.9 | 2.09% | motif file (matrix) |
svg |
26 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-6 | -1.505e+01 | 0.0000 | 71.0 | 9.58% | 2398.6 | 5.05% | motif file (matrix) |
svg |
27 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-6 | -1.489e+01 | 0.0000 | 38.0 | 5.13% | 964.7 | 2.03% | motif file (matrix) |
svg |
28 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-6 | -1.464e+01 | 0.0000 | 39.0 | 5.26% | 1014.9 | 2.14% | motif file (matrix) |
svg |
29 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-6 | -1.439e+01 | 0.0000 | 139.0 | 18.76% | 5906.1 | 12.43% | motif file (matrix) |
svg |
30 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.411e+01 | 0.0000 | 21.0 | 2.83% | 372.1 | 0.78% | motif file (matrix) |
svg |
31 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-6 | -1.392e+01 | 0.0000 | 42.0 | 5.67% | 1169.1 | 2.46% | motif file (matrix) |
svg |
32 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-5 | -1.334e+01 | 0.0000 | 65.0 | 8.77% | 2231.5 | 4.70% | motif file (matrix) |
svg |
33 |
| Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer | 1e-5 | -1.225e+01 | 0.0001 | 90.0 | 12.15% | 3549.4 | 7.47% | motif file (matrix) |
svg |
34 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-5 | -1.210e+01 | 0.0001 | 41.0 | 5.53% | 1216.4 | 2.56% | motif file (matrix) |
svg |
35 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.177e+01 | 0.0001 | 10.0 | 1.35% | 104.3 | 0.22% | motif file (matrix) |
svg |
36 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-4 | -1.140e+01 | 0.0001 | 61.0 | 8.23% | 2178.8 | 4.59% | motif file (matrix) |
svg |
37 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-4 | -1.128e+01 | 0.0001 | 251.0 | 33.87% | 12728.9 | 26.80% | motif file (matrix) |
svg |
38 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-4 | -1.123e+01 | 0.0001 | 52.0 | 7.02% | 1763.9 | 3.71% | motif file (matrix) |
svg |
39 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-4 | -1.098e+01 | 0.0002 | 24.0 | 3.24% | 569.9 | 1.20% | motif file (matrix) |
svg |
40 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-4 | -1.089e+01 | 0.0002 | 44.0 | 5.94% | 1417.3 | 2.98% | motif file (matrix) |
svg |
41 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-4 | -1.067e+01 | 0.0002 | 17.0 | 2.29% | 327.4 | 0.69% | motif file (matrix) |
svg |
42 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-4 | -1.041e+01 | 0.0003 | 54.0 | 7.29% | 1915.9 | 4.03% | motif file (matrix) |
svg |
43 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-4 | -1.041e+01 | 0.0003 | 41.0 | 5.53% | 1311.0 | 2.76% | motif file (matrix) |
svg |
44 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-4 | -1.009e+01 | 0.0003 | 30.0 | 4.05% | 847.6 | 1.78% | motif file (matrix) |
svg |
45 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-4 | -9.806e+00 | 0.0004 | 83.0 | 11.20% | 3424.7 | 7.21% | motif file (matrix) |
svg |
46 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-4 | -9.785e+00 | 0.0004 | 37.0 | 4.99% | 1167.4 | 2.46% | motif file (matrix) |
svg |
47 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-4 | -9.691e+00 | 0.0005 | 22.0 | 2.97% | 540.7 | 1.14% | motif file (matrix) |
svg |
48 |
| Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer | 1e-3 | -9.128e+00 | 0.0008 | 64.0 | 8.64% | 2513.1 | 5.29% | motif file (matrix) |
svg |
49 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-3 | -8.887e+00 | 0.0010 | 24.0 | 3.24% | 653.2 | 1.38% | motif file (matrix) |
svg |
50 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-3 | -8.812e+00 | 0.0011 | 54.0 | 7.29% | 2040.8 | 4.30% | motif file (matrix) |
svg |
51 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-3 | -8.380e+00 | 0.0016 | 8.0 | 1.08% | 101.9 | 0.21% | motif file (matrix) |
svg |
52 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-3 | -8.269e+00 | 0.0018 | 234.0 | 31.58% | 12263.8 | 25.82% | motif file (matrix) |
svg |
53 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-3 | -8.061e+00 | 0.0022 | 15.0 | 2.02% | 333.8 | 0.70% | motif file (matrix) |
svg |
54 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -7.796e+00 | 0.0028 | 22.0 | 2.97% | 620.6 | 1.31% | motif file (matrix) |
svg |
55 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-3 | -7.582e+00 | 0.0034 | 7.0 | 0.94% | 87.4 | 0.18% | motif file (matrix) |
svg |
56 |
| RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer | 1e-3 | -7.274e+00 | 0.0045 | 39.0 | 5.26% | 1429.6 | 3.01% | motif file (matrix) |
svg |
57 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-3 | -7.187e+00 | 0.0048 | 50.0 | 6.75% | 1983.5 | 4.18% | motif file (matrix) |
svg |
58 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-3 | -7.087e+00 | 0.0052 | 54.0 | 7.29% | 2197.4 | 4.63% | motif file (matrix) |
svg |
59 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-3 | -7.064e+00 | 0.0053 | 117.0 | 15.79% | 5631.3 | 11.85% | motif file (matrix) |
svg |
60 |
| ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -6.682e+00 | 0.0076 | 43.0 | 5.80% | 1676.1 | 3.53% | motif file (matrix) |
svg |
61 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -6.674e+00 | 0.0076 | 24.0 | 3.24% | 766.8 | 1.61% | motif file (matrix) |
svg |
62 |
| Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.655e+00 | 0.0076 | 60.0 | 8.10% | 2555.5 | 5.38% | motif file (matrix) |
svg |
63 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-2 | -6.569e+00 | 0.0081 | 46.0 | 6.21% | 1838.2 | 3.87% | motif file (matrix) |
svg |
64 |
| Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer | 1e-2 | -6.561e+00 | 0.0081 | 39.0 | 5.26% | 1487.1 | 3.13% | motif file (matrix) |
svg |
65 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-2 | -6.256e+00 | 0.0107 | 45.0 | 6.07% | 1818.0 | 3.83% | motif file (matrix) |
svg |
66 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-2 | -6.097e+00 | 0.0124 | 59.0 | 7.96% | 2566.4 | 5.40% | motif file (matrix) |
svg |
67 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-2 | -5.725e+00 | 0.0177 | 13.0 | 1.75% | 341.6 | 0.72% | motif file (matrix) |
svg |
68 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-2 | -5.385e+00 | 0.0245 | 47.0 | 6.34% | 2012.3 | 4.24% | motif file (matrix) |
svg |
69 |
| Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer | 1e-2 | -5.363e+00 | 0.0247 | 31.0 | 4.18% | 1192.4 | 2.51% | motif file (matrix) |
svg |
70 |
| STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer | 1e-2 | -5.354e+00 | 0.0247 | 23.0 | 3.10% | 804.2 | 1.69% | motif file (matrix) |
svg |
71 |
| PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer | 1e-2 | -5.347e+00 | 0.0247 | 17.0 | 2.29% | 529.4 | 1.11% | motif file (matrix) |
svg |
72 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.979e+00 | 0.0348 | 27.0 | 3.64% | 1026.7 | 2.16% | motif file (matrix) |
svg |
73 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-2 | -4.885e+00 | 0.0377 | 108.0 | 14.57% | 5497.4 | 11.57% | motif file (matrix) |
svg |
74 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-2 | -4.857e+00 | 0.0382 | 51.0 | 6.88% | 2289.5 | 4.82% | motif file (matrix) |
svg |