Information for 7-CACACAATGACAA (Motif 8)

G T A C G T C A G T A C G T C A T A G C C G T A C T G A C A G T A C T G C G T A A G T C T C G A C G T A
Reverse Opposite:
A C G T A G C T A C T G G A C T A G T C G T C A A G C T A C G T A C T G A C G T A C T G A C G T A C T G
p-value:1e-15
log p-value:-3.531e+01
Information Content per bp:1.789
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif13.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets39.1 +/- 20.4bp
Average Position of motif in Background48.7 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CACACAATGACAA
CTCACACAATGGCGC
 A C G T A C G T G T A C G T C A G T A C G T C A T A G C C G T A C T G A C A G T A C T G C G T A A G T C T C G A C G T A
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CACACAATGACAA
--GACAATGNN--
 G T A C G T C A G T A C G T C A T A G C C G T A C T G A C A G T A C T G C G T A A G T C T C G A C G T A
A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CACACAATGACAA
VRAACAATGG---
 G T A C G T C A G T A C G T C A T A G C C G T A C T G A C A G T A C T G C G T A A G T C T C G A C G T A
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CACACAATGACAA
---ACAAAG----
 G T A C G T C A G T A C G T C A T A G C C G T A C T G A C A G T A C T G C G T A A G T C T C G A C G T A
A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:5
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CACACAATGACAA
ATTTGCATACAATGG---
 A C G T A C G T A C G T A C G T A C G T G T A C G T C A G T A C G T C A T A G C C G T A C T G A C A G T A C T G C G T A A G T C T C G A C G T A
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CACACAATGACAA
VRRACAAWGG---
 G T A C G T C A G T A C G T C A T A G C C G T A C T G A C A G T A C T G C G T A A G T C T C G A C G T A
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CACACAATGACAA
-RAACAATGGN--
 G T A C G T C A G T A C G T C A T A G C C G T A C T G A C A G T A C T G C G T A A G T C T C G A C G T A
A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T

PB0177.1_Sox7_2/Jaspar

Match Rank:8
Score:0.61
Offset:-8
Orientation:reverse strand
Alignment:--------CACACAATGACAA-
NNCNNNCNCANACAATTAGNAC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C G T C A G T A C G T C A T A G C C G T A C T G A C A G T A C T G C G T A A G T C T C G A C G T A A C G T
T C G A A T C G T G A C C A T G A G C T G T C A A G T C C G T A A T G C C T G A A T G C C G T A A G T C C G T A C G T A G C A T C A G T G C T A T A C G A T G C G C T A T G A C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CACACAATGACAA-
----CAAGGHCANV
 G T A C G T C A G T A C G T C A T A G C C G T A C T G A C A G T A C T G C G T A A G T C T C G A C G T A A C G T
A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CACACAATGACAA
-----RHTGWCAR
 G T A C G T C A G T A C G T C A T A G C C G T A C T G A C A G T A C T G C G T A A G T C T C G A C G T A
A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A