Information for 21-GCGTGAGAACCCA (Motif 33)

C T A G A T G C T C A G A C G T A T C G C T G A C T A G C T G A C G T A A T G C G T A C T A G C T G C A
Reverse Opposite:
A C G T A T C G A C T G A T C G C G A T G A C T A G T C A G C T A T G C C G T A A G T C A T C G G A T C
p-value:1e-7
log p-value:-1.654e+01
Information Content per bp:1.668
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.56%
Number of Background Sequences with motif263.1
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets41.7 +/- 23.4bp
Average Position of motif in Background49.8 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GCGTGAGAACCCA
-CSTGGGAAAD--
 C T A G A T G C T C A G A C G T A T C G C T G A C T A G C T G A C G T A A T G C G T A C T A G C T G C A
A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GCGTGAGAACCCA
TATCATTAGAACGCT
 A C G T A C G T C T A G A T G C T C A G A C G T A T C G C T G A C T A G C T G A C G T A A T G C G T A C T A G C T G C A
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCGTGAGAACCCA
TTGCGTGCVA-----
 A C G T A C G T C T A G A T G C T C A G A C G T A T C G C T G A C T A G C T G A C G T A A T G C G T A C T A G C T G C A
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCGTGAGAACCCA
TGCGTG--------
 A C G T C T A G A T G C T C A G A C G T A T C G C T G A C T A G C T G A C G T A A T G C G T A C T A G C T G C A
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0162.1_Six2/Jaspar

Match Rank:5
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GCGTGAGAACCCA--
ANANGTGATACCCCATT
 A C G T A C G T C T A G A T G C T C A G A C G T A T C G C T G A C T A G C T G A C G T A A T G C G T A C T A G C T G C A A C G T A C G T
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:6
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GCGTGAGAACCCA
AAGGTGTKAA----
 A C G T C T A G A T G C T C A G A C G T A T C G C T G A C T A G C T G A C G T A A T G C G T A C T A G C T G C A
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T

PH0161.1_Six1/Jaspar

Match Rank:7
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--GCGTGAGAACCCA--
ANNNATGATACCCCATC
 A C G T A C G T C T A G A T G C T C A G A C G T A T C G C T G A C T A G C T G A C G T A A T G C G T A C T A G C T G C A A C G T A C G T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:8
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:GCGTGAGAACCCA--
---GGACCACCCACG
 C T A G A T G C T C A G A C G T A T C G C T G A C T A G C T G A C G T A A T G C G T A C T A G C T G C A A C G T A C G T
A C G T A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

PH0165.1_Six6_1/Jaspar

Match Rank:9
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--GCGTGAGAACCCA--
ANANNTGATACCCTATN
 A C G T A C G T C T A G A T G C T C A G A C G T A T C G C T G A C T A G C T G A C G T A A T G C G T A C T A G C T G C A A C G T A C G T
T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GCGTGAGAACCCA
AGGTGTTAAT---
 C T A G A T G C T C A G A C G T A T C G C T G A C T A G C T G A C G T A A T G C G T A C T A G C T G C A
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T