Information for 19-CCTCATTAGGACA (Motif 30)

A G T C A G T C A G C T G T A C G T C A A C G T A C G T C G T A A C T G A C T G C G T A G T A C C G T A
Reverse Opposite:
A C G T A C T G A C G T A G T C A G T C A C G T C G T A C G T A A C G T A C T G C T G A A C T G A C T G
p-value:1e-8
log p-value:-1.984e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.2 +/- 28.3bp
Average Position of motif in Background50.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0194.1_Zbtb12_2/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCTCATTAGGACA--
TATCATTAGAACGCT
 A G T C A G T C A G C T G T A C G T C A A C G T A C G T C G T A A C T G A C T G C G T A G T A C C G T A A C G T A C G T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

PB0096.1_Zfp187_1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CCTCATTAGGACA---
--TTATTAGTACATAN
 A G T C A G T C A G C T G T A C G T C A A C G T A C G T C G T A A C T G A C T G C G T A G T A C C G T A A C G T A C G T A C G T
A C G T A C G T C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCTCATTAGGACA
AGCTCATTAT----
 A C G T A G T C A G T C A G C T G T A C G T C A A C G T A C G T C G T A A C T G A C T G C G T A G T A C C G T A
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T A C G T A C G T A C G T

PH0058.1_Hoxb3/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CCTCATTAGGACA
TNNNACTAATTAGNTCA
 A C G T A C G T A C G T A C G T A G T C A G T C A G C T G T A C G T C A A C G T A C G T C G T A A C T G A C T G C G T A G T A C C G T A
G C A T G A T C A G T C G T C A T C G A A T G C G A C T G T C A C G T A C G A T A C G T C T G A T A C G A T G C A C G T A G T C C G T A

NOTO/MA0710.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCTCATTAGGACA
GCTAATTAGC---
 A G T C A G T C A G C T G T A C G T C A A C G T A C G T C G T A A C T G A C T G C G T A G T A C C G T A
T A C G G A T C G C A T G T C A C G T A A C G T C A G T C T G A T C A G A T G C A C G T A C G T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CCTCATTAGGACA
GCAACCTCATTATNNNN
 A C G T A C G T A C G T A C G T A G T C A G T C A G C T G T A C G T C A A C G T A C G T C G T A A C T G A C T G C G T A G T A C C G T A
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

EMX1/MA0612.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCTCATTAGGACA
NNTAATTAGN---
 A G T C A G T C A G C T G T A C G T C A A C G T A C G T C G T A A C T G A C T G C G T A G T A C C G T A
T C A G A T C G G A C T G T C A G C T A G C A T A G C T C T G A C T A G A C T G A C G T A C G T A C G T

PH0089.1_Isx/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCTCATTAGGACA
ACNNCTAATTAGNNNN
 A C G T A C G T A C G T A G T C A G T C A G C T G T A C G T C A A C G T A C G T C G T A A C T G A C T G C G T A G T A C C G T A
G C T A A T G C T A C G T G C A G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C T G C T G A A C T G C G A T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCTCATTAGGACA
CCATATATGGNA-
 A G T C A G T C A G C T G T A C G T C A A C G T A C G T C G T A A C T G A C T G C G T A G T A C C G T A
A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A A C G T

GSX1/MA0892.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCTCATTAGGACA
CCTAATTAAA---
 A G T C A G T C A G C T G T A C G T C A A C G T A C G T C G T A A C T G A C T G C G T A G T A C C G T A
G T A C A T G C G A C T G T C A T C G A G C A T G A C T C G T A T C G A G C T A A C G T A C G T A C G T