Information for 18-TCTGCATWKAAAACAG (Motif 20)

A C G T A T G C A G C T A T C G A T G C C G T A A C G T C G T A C A T G C G T A C G T A C G T A C T G A A T G C C G T A A T C G
Reverse Opposite:
A T G C C G A T A T C G G A C T C G A T A C G T C G A T G T A C C G A T G T C A C G A T T A C G T A G C C T G A A T C G G T C A
p-value:1e-10
log p-value:-2.501e+01
Information Content per bp:1.791
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.2 +/- 20.8bp
Average Position of motif in Background40.8 +/- 3.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TCTGCATWKAAAACAG
ATTTGCATAACAAAG--
 A C G T A C G T A T G C A G C T A T C G A T G C C G T A A C G T C G T A C A T G C G T A C G T A C G T A C T G A A T G C C G T A A T C G
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G A C G T A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCTGCATWKAAAACAG
ATTTGCATAACAATG--
 A C G T A C G T A T G C A G C T A T C G A T G C C G T A A C G T C G T A C A T G C G T A C G T A C G T A C T G A A T G C C G T A A T C G
G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TCTGCATWKAAAACAG
ATTTGCATACAATGG--
 A C G T A C G T A T G C A G C T A T C G A T G C C G T A A C G T C G T A C A T G C G T A C G T A C G T A C T G A A T G C C G T A A T C G
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TCTGCATWKAAAACAG
TACATGTGCACATAAAA---
 A C G T A C G T A C G T A C G T A C G T A T G C A G C T A T C G A T G C C G T A A C G T C G T A C A T G C G T A C G T A C G T A C T G A A T G C C G T A A T C G
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A A C G T A C G T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TCTGCATWKAAAACAG
AAAATATGCATAATAAA---
 A C G T A C G T A C G T A C G T A C G T A T G C A G C T A T C G A T G C C G T A A C G T C G T A C A T G C G T A C G T A C G T A C T G A A T G C C G T A A T C G
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TCTGCATWKAAAACAG
TNTAATTTGCATACNA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A T C G A T G C C G T A A C G T C G T A C A T G C G T A C G T A C G T A C T G A A T G C C G T A A T C G
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TCTGCATWKAAAACAG
TNTAATTTGCATACNA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A T C G A T G C C G T A A C G T C G T A C A T G C G T A C G T A C G T A C T G A A T G C C G T A A T C G
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TCTGCATWKAAAACAG
----NATTCAAAT---
 A C G T A T G C A G C T A T C G A T G C C G T A A C G T C G T A C A T G C G T A C G T A C G T A C T G A A T G C C G T A A T C G
A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TCTGCATWKAAAACAG
TNTAATTTGCATANNN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A T C G A T G C C G T A A C G T C G T A C A T G C G T A C G T A C G T A C T G A A T G C C G T A A T C G
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TCTGCATWKAAAACAG
ATTTGCATAT-------
 A C G T A C G T A T G C A G C T A T C G A T G C C G T A A C G T C G T A C A T G C G T A C G T A C G T A C T G A A T G C C G T A A T C G
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T