Information for 17-HGACAAVVCTATAAAT (Motif 19)

G C T A A T C G C G T A A G T C C G T A C G T A T A C G T A C G A T G C C G A T C G T A A G C T C G T A C G T A C G T A C G A T
Reverse Opposite:
C G T A C G A T A C G T A C G T C T G A C G A T C G T A A T C G A G T C A T G C A C G T A C G T A C T G A C G T A T G C C A G T
p-value:1e-11
log p-value:-2.562e+01
Information Content per bp:1.778
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.2 +/- 28.8bp
Average Position of motif in Background25.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2D/MA0773.1/Jaspar

Match Rank:1
Score:0.57
Offset:7
Orientation:forward strand
Alignment:HGACAAVVCTATAAAT---
-------ACTATAAATAGA
 G C T A A T C G C G T A A G T C C G T A C G T A T A C G T A C G A T G C C G A T C G T A A G C T C G T A C G T A C G T A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

MEF2B/MA0660.1/Jaspar

Match Rank:2
Score:0.57
Offset:7
Orientation:forward strand
Alignment:HGACAAVVCTATAAAT---
-------GCTATAAATAGC
 G C T A A T C G C G T A A G T C C G T A C G T A T A C G T A C G A T G C C G A T C G T A A G C T C G T A C G T A C G T A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

MEF2A/MA0052.3/Jaspar

Match Rank:3
Score:0.57
Offset:7
Orientation:forward strand
Alignment:HGACAAVVCTATAAAT---
-------TCTAAAAATAGA
 G C T A A T C G C G T A A G T C C G T A C G T A T A C G T A C G A T G C C G A T C G T A A G C T C G T A C G T A C G T A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

TBP/MA0108.2/Jaspar

Match Rank:4
Score:0.57
Offset:8
Orientation:forward strand
Alignment:HGACAAVVCTATAAAT-------
--------GTATAAAAGGCGGGG
 G C T A A T C G C G T A A G T C C G T A C G T A T A C G T A C G A T G C C G A T C G T A A G C T C G T A C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

POL012.1_TATA-Box/Jaspar

Match Rank:5
Score:0.57
Offset:8
Orientation:forward strand
Alignment:HGACAAVVCTATAAAT-------
--------GTATAAAAGGCGGGG
 G C T A A T C G C G T A A G T C C G T A C G T A T A C G T A C G A T G C C G A T C G T A A G C T C G T A C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-HGACAAVVCTATAAAT
RNAACAATGG-------
 A C G T G C T A A T C G C G T A A G T C C G T A C G T A T A C G T A C G A T G C C G A T C G T A A G C T C G T A C G T A C G T A C G A T
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:HGACAAVVCTATAAAT
--ACAAAG--------
 G C T A A T C G C G T A A G T C C G T A C G T A T A C G T A C G A T G C C G A T C G T A A G C T C G T A C G T A C G T A C G A T
A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:8
Score:0.56
Offset:6
Orientation:forward strand
Alignment:HGACAAVVCTATAAAT---
------GGCCATAAATCAC
 G C T A A T C G C G T A A G T C C G T A C G T A T A C G T A C G A T G C C G A T C G T A A G C T C G T A C G T A C G T A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-HGACAAVVCTATAAAT
VRRACAAWGG-------
 A C G T G C T A A T C G C G T A A G T C C G T A C G T A T A C G T A C G A T G C C G A T C G T A A G C T C G T A C G T A C G T A C G A T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:HGACAAVVCTATAAAT
-RACAAWGG-------
 G C T A A T C G C G T A A G T C C G T A C G T A T A C G T A C G A T G C C G A T C G T A A G C T C G T A C G T A C G T A C G A T
A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T