Information for 7-AATAGSWTTAACTGCA (Motif 10)

C G T A C G T A C G A T C G T A C T A G A T C G C G T A A G C T A C G T G T C A G T C A G T A C A C G T C A T G A G T C G T C A
Reverse Opposite:
A C G T A C T G G A T C C G T A A C T G A C G T A C G T C G T A C T G A C G A T A T G C A G T C A C G T C G T A A C G T C G A T
p-value:1e-14
log p-value:-3.289e+01
Information Content per bp:1.797
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.4 +/- 30.7bp
Average Position of motif in Background74.6 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0126.1_Obox6/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AATAGSWTTAACTGCA
AAAAACGGATTATTG---
 A C G T A C G T C G T A C G T A C G A T C G T A C T A G A T C G C G T A A G C T A C G T G T C A G T C A G T A C A C G T C A T G A G T C G T C A
G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G A C G T A C G T A C G T

PH0125.1_Obox5_2/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AATAGSWTTAACTGCA
NANAGGGATTAATTATN
 A C G T C G T A C G T A C G A T C G T A C T A G A T C G C G T A A G C T A C G T G T C A G T C A G T A C A C G T C A T G A G T C G T C A
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

PH0121.1_Obox1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AATAGSWTTAACTGCA
TTAAGGGGATTAACTAC-
 A C G T A C G T C G T A C G T A C G A T C G T A C T A G A T C G C G T A A G C T A C G T G T C A G T C A G T A C A C G T C A T G A G T C G T C A
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C A C G T

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AATAGSWTTAACTGCA
GTAATCDGATTA------
 A C G T A C G T C G T A C G T A C G A T C G T A C T A G A T C G C G T A A G C T A C G T G T C A G T C A G T A C A C G T C A T G A G T C G T C A
C A T G C G A T T C G A C T G A G C A T A G T C C A T G T C A G C T G A A C G T G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AATAGSWTTAACTGCA
AAGAGGATTAG-----
 C G T A C G T A C G A T C G T A C T A G A T C G C G T A A G C T A C G T G T C A G T C A G T A C A C G T C A T G A G T C G T C A
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T A C G T A C G T A C G T A C G T

PH0124.1_Obox5_1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AATAGSWTTAACTGCA
TAGAGGGATTAAATTTC
 A C G T C G T A C G T A C G A T C G T A C T A G A T C G C G T A A G C T A C G T G T C A G T C A G T A C A C G T C A T G A G T C G T C A
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AATAGSWTTAACTGCA
NTAATBNAATTA------
 A C G T A C G T C G T A C G T A C G A T C G T A C T A G A T C G C G T A A G C T A C G T G T C A G T C A G T A C A C G T C A T G A G T C G T C A
G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AATAGSWTTAACTGCA
---NGGATTAA-----
 C G T A C G T A C G A T C G T A C T A G A T C G C G T A A G C T A C G T G T C A G T C A G T A C A C G T C A T G A G T C G T C A
A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T

Hmx1/MA0896.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AATAGSWTTAACTGCA---
--ANNCATTAATTGCTNGN
 C G T A C G T A C G A T C G T A C T A G A T C G C G T A A G C T A C G T G T C A G T C A G T A C A C G T C A T G A G T C G T C A A C G T A C G T A C G T
A C G T A C G T T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AATAGSWTTAACTGCA---
--ANNCATTAATTGCTNGN
 C G T A C G T A C G A T C G T A C T A G A T C G C G T A A G C T A C G T G T C A G T C A G T A C A C G T C A T G A G T C G T C A A C G T A C G T A C G T
A C G T A C G T T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T