Information for 9-CRCGAGCCASSCTCWC (Motif 7)

A G T C C T A G G T A C A C T G T C G A A C T G A G T C A G T C C G T A A T C G A T G C A T G C A C G T A T G C C G T A A G T C
Reverse Opposite:
C T A G C G A T A T C G C G T A A T C G A T C G A T G C C G A T A C T G A C T G A G T C A C G T A G T C C A T G A G T C C T A G
p-value:1e-15
log p-value:-3.518e+01
Information Content per bp:1.766
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.9 +/- 23.7bp
Average Position of motif in Background52.8 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CRCGAGCCASSCTCWC
AGCGCGCC--------
 A G T C C T A G G T A C A C T G T C G A A C T G A G T C A G T C C G T A A T C G A T G C A T G C A C G T A T G C C G T A A G T C
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:2
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CRCGAGCCASSCTCWC-
-----GCCACRCCCACY
 A G T C C T A G G T A C A C T G T C G A A C T G A G T C A G T C C G T A A T C G A T G C A T G C A C G T A T G C C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T

Tcfl5/MA0632.1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CRCGAGCCASSCTCWC
GGCACGTGCC--------
 A C G T A C G T A G T C C T A G G T A C A C T G T C G A A C T G A G T C A G T C C G T A A T C G A T G C A T G C A C G T A T G C C G T A A G T C
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HES5/MA0821.1/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CRCGAGCCASSCTCWC
CGGCACGTGCCA-------
 A C G T A C G T A C G T A G T C C T A G G T A C A C T G T C G A A C T G A G T C A G T C C G T A A T C G A T G C A T G C A C G T A T G C C G T A A G T C
G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HES7/MA0822.1/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CRCGAGCCASSCTCWC
TGGCACGTGCCA-------
 A C G T A C G T A C G T A G T C C T A G G T A C A C T G T C G A A C T G A G T C A G T C C G T A A T C G A T G C A T G C A C G T A T G C C G T A A G T C
G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HEY1/MA0823.1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CRCGAGCCASSCTCWC
GACACGTGCC--------
 A C G T A C G T A G T C C T A G G T A C A C T G T C G A A C T G A G T C A G T C C G T A A T C G A T G C A T G C A C G T A T G C C G T A A G T C
T A C G T C G A A G T C T C G A A G T C A T C G A G C T C T A G A G T C T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CRCGAGCCASSCTCWC
--CGTGCCAAG-----
 A G T C C T A G G T A C A C T G T C G A A C T G A G T C A G T C C G T A A T C G A T G C A T G C A C G T A T G C C G T A A G T C
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

SP4/MA0685.1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CRCGAGCCASSCTCWC---
--TAAGCCACGCCCCCTTT
 A G T C C T A G G T A C A C T G T C G A A C T G A G T C A G T C C G T A A T C G A T G C A T G C A C G T A T G C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

Hes1/MA1099.1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CRCGAGCCASSCTCWC
NNCGCGTGNN--------
 A C G T A C G T A G T C C T A G G T A C A C T G T C G A A C T G A G T C A G T C C G T A A T C G A T G C A T G C A C G T A T G C C G T A A G T C
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Klf12/MA0742.1/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CRCGAGCCASSCTCWC---
----GACCACGCCCTTATT
 A G T C C T A G G T A C A C T G T C G A A C T G A G T C A G T C C G T A A T C G A T G C A T G C A C G T A T G C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T