Information for 3-CTAATCAGCAAGGRCT (Motif 6)

A T G C A C G T G T C A T C G A C A G T A G T C C G T A A C T G T A G C C G T A C G T A A C T G A T C G T C A G A G T C A C G T
Reverse Opposite:
G T C A C T A G A G T C A T G C G T A C C G A T A C G T A C T G G T A C C G A T C T A G G C T A A C G T A C G T C G T A A T C G
p-value:1e-13
log p-value:-3.128e+01
Information Content per bp:1.714
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets68.0 +/- 5.6bp
Average Position of motif in Background46.3 +/- 14.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0098.1_Lhx8/Jaspar

Match Rank:1
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CTAATCAGCAAGGRCT
ACCCCTAATTAGCGGTG---
 A C G T A C G T A C G T A C G T A T G C A C G T G T C A T C G A C A G T A G T C C G T A A C T G T A G C C G T A C G T A A C T G A T C G T C A G A G T C A C G T
G C T A T G A C T G A C T G A C T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A G T C C A T G C A T G A C G T C T A G A C G T A C G T A C G T

PH0032.1_Evx2/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTAATCAGCAAGGRCT
ANCGCTAATTAGCGGTN---
 A C G T A C G T A C G T A C G T A T G C A C G T G T C A T C G A C A G T A G T C C G T A A C T G T A G C C G T A C G T A A C T G A T C G T C A G A G T C A C G T
C G T A T G A C T G A C T A C G T A G C A G C T T G C A C G T A A C G T A C G T C T G A T A C G A G T C C A T G C T A G A C G T T C A G A C G T A C G T A C G T

LHX6/MA0658.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTAATCAGCAAGGRCT
ACTAATTAGC-------
 A C G T A T G C A C G T G T C A T C G A C A G T A G T C C G T A A C T G T A G C C G T A C G T A A C T G A T C G T C A G A G T C A C G T
T C G A A G T C A G C T T C G A G T C A A G C T A G C T C T G A T C A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0094.1_Lhx4/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CTAATCAGCAAGGRCT
TAAACTAATTAGCTTTG---
 A C G T A C G T A C G T A C G T A T G C A C G T G T C A T C G A C A G T A G T C C G T A A C T G T A G C C G T A C G T A A C T G A T C G T C A G A G T C A C G T
C A G T G T C A C G T A T C G A A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A T G C A C G T C G A T A C G T C T A G A C G T A C G T A C G T

PH0097.1_Lhx6_2/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CTAATCAGCAAGGRCT
TCCACTAATTAGCGGTT---
 A C G T A C G T A C G T A C G T A T G C A C G T G T C A T C G A C A G T A G T C C G T A A C T G T A G C C G T A C G T A A C T G A T C G T C A G A G T C A C G T
G C A T T G A C G A T C T C G A G A T C G A C T T C G A C T G A A G C T A G C T C T G A C T A G A G T C C A T G C T A G C G A T A C G T A C G T A C G T A C G T

PH0034.1_Gbx2/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CTAATCAGCAAGGRCT
AGCGCTAATTAGCGATT---
 A C G T A C G T A C G T A C G T A T G C A C G T G T C A T C G A C A G T A G T C C G T A A C T G T A G C C G T A C G T A A C T G A T C G T C A G A G T C A C G T
C G T A T A C G T G A C T C A G A T G C A G C T G T C A G C T A C A G T A C G T C T G A T A C G A G T C T A C G C T G A A C G T C A G T A C G T A C G T A C G T

EVX2/MA0888.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTAATCAGCAAGGRCT
NNTAATTANN-------
 A C G T A T G C A C G T G T C A T C G A C A G T A G T C C G T A A C T G T A G C C G T A C G T A A C T G A T C G T C A G A G T C A C G T
T A C G A T G C G A C T T C G A T G C A A G C T A C G T C T G A A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0155.1_Prrx2/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CTAATCAGCAAGGRCT
AAAGCTAATTAGCGAAA---
 A C G T A C G T A C G T A C G T A T G C A C G T G T C A T C G A C A G T A G T C C G T A A C T G T A G C C G T A C G T A A C T G A T C G T C A G A G T C A C G T
C G T A T G C A G T C A T C A G G A T C A G C T C T G A C G T A G A C T A G C T C T G A C T A G A G T C C A T G C T G A C G T A C T G A A C G T A C G T A C G T

EVX1/MA0887.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTAATCAGCAAGGRCT
GNTAATTANN-------
 A C G T A T G C A C G T G T C A T C G A C A G T A G T C C G T A A C T G T A G C C G T A C G T A A C T G A T C G T C A G A G T C A C G T
A T C G T A G C G A C T C T G A T G C A A G C T A G C T C T G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EMX2/MA0886.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTAATCAGCAAGGRCT
NCTAATTANN-------
 A C G T A T G C A C G T G T C A T C G A C A G T A G T C C G T A A C T G T A G C C G T A C G T A A C T G A T C G T C A G A G T C A C G T
T A C G A G T C A C G T G T C A C G T A A C G T C A G T C T G A T A C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T