Information for 3-ACTGATTAGWTTA (Motif 4)

T C G A T A G C C G A T A C T G C G T A A C G T A G C T C G T A T A C G C G T A A C G T C G A T T C G A
Reverse Opposite:
A G C T G C T A T G C A C G A T A G T C C G A T T C G A T G C A G C A T G T A C G C T A A C T G A G C T
p-value:1e-15
log p-value:-3.567e+01
Information Content per bp:1.603
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif5.90%
Number of Background Sequences with motif523.3
Percentage of Background Sequences with motif1.15%
Average Position of motif in Targets47.6 +/- 25.5bp
Average Position of motif in Background50.5 +/- 34.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DUX4/MA0468.1/Jaspar

Match Rank:1
Score:0.82
Offset:2
Orientation:reverse strand
Alignment:ACTGATTAGWTTA
--TGATTAAATTA
 T C G A T A G C C G A T A C T G C G T A A C G T A G C T C G T A T A C G C G T A A C G T C G A T T C G A
A C G T A C G T C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A

DUXA/MA0884.1/Jaspar

Match Rank:2
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:ACTGATTAGWTTA-
-NTGATTAAATTAN
 T C G A T A G C C G A T A C T G C G T A A C G T A G C T C G T A T A C G C G T A A C G T C G A T T C G A A C G T
A C G T G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:3
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:ACTGATTAGWTTA--
NWTGATTRGRTTAWN
 T C G A T A G C C G A T A C T G C G T A A C G T A G C T C G T A T A C G C G T A A C G T C G A T T C G A A C G T A C G T
C G T A G C A T C G A T C T A G C G T A A C G T A C G T C T G A T C A G C T A G A C G T A C G T G C T A C G T A G T A C

PHOX2A/MA0713.1/Jaspar

Match Rank:4
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:ACTGATTAGWTTA
--TAATTAAATTA
 T C G A T A G C C G A T A C T G C G T A A C G T A G C T C G T A T A C G C G T A A C G T C G A T T C G A
A C G T A C G T G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A

Phox2b/MA0681.1/Jaspar

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:ACTGATTAGWTTA
--TAATTAAATTA
 T C G A T A G C C G A T A C T G C G T A A C G T A G C T C G T A T A C G C G T A A C G T C G A T T C G A
A C G T A C G T G C A T C G T A C T G A A G C T A G C T C T G A T C G A C T G A A G C T G A C T C G T A

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:ACTGATTAGWTTA
-YTAATYNRATTA
 T C G A T A G C C G A T A C T G C G T A A C G T A G C T C G T A T A C G C G T A A C G T C G A T T C G A
A C G T G A T C G C A T C T G A C G T A A G C T A G C T C G T A T C G A C T G A A C G T G C A T C G T A

PROP1/MA0715.1/Jaspar

Match Rank:7
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ACTGATTAGWTTA
--TAATTAAATTA
 T C G A T A G C C G A T A C T G C G T A A C G T A G C T C G T A T A C G C G T A A C G T C G A T T C G A
A C G T A C G T G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ACTGATTAGWTTA
CNGTGATTTN----
 A C G T T C G A T A G C C G A T A C T G C G T A A C G T A G C T C G T A T A C G C G T A A C G T C G A T T C G A
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T

PH0014.1_Cphx/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ACTGATTAGWTTA-
NTTGATTNNATCAN
 T C G A T A G C C G A T A C T G C G T A A C G T A G C T C G T A T A C G C G T A A C G T C G A T T C G A A C G T
C G A T A G C T C G A T C T A G C G T A A C G T A C G T A T G C T A C G G T C A A C G T A G T C C G T A G A C T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ACTGATTAGWTTA
ATTGATTYND---
 T C G A T A G C C G A T A C T G C G T A A C G T A G C T C G T A T A C G C G T A A C G T C G A T T C G A
C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T A C G T A C G T A C G T