Information for 13-TARCACCCAGCWGWTT (Motif 30)

A C G T T C G A C T G A A G T C C G T A A T G C G T A C G T A C G T C A C T A G A G T C C G A T A C T G C G T A A C G T A C G T
Reverse Opposite:
C G T A G T C A C G A T A G T C C G T A A C T G G A T C A C G T A C T G C A T G T A C G A C G T A C T G A G C T A C G T C G T A
p-value:1e-8
log p-value:-1.908e+01
Information Content per bp:1.763
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.8 +/- 23.0bp
Average Position of motif in Background48.5 +/- 17.8bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TARCACCCAGCWGWTT---
NTTMRCACNNNVSTGYKAANT
 A C G T A C G T A C G T T C G A C T G A A G T C C G T A A T G C G T A C G T A C G T C A C T A G A G T C C G A T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G C A T A G C T G A C T T G C A C T G A T A G C C T G A A T G C G A T C A G C T T G C A T C A G A T C G G A C T T A C G G A C T A C T G C T G A C T G A G C T A G C A T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:2
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TARCACCCAGCWGWTT
------HCAGCTGDTN
 A C G T T C G A C T G A A G T C C G T A A T G C G T A C G T A C G T C A C T A G A G T C C G A T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:3
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TARCACCCAGCWGWTT
------CCAGCTGTTN
 A C G T T C G A C T G A A G T C C G T A A T G C G T A C G T A C G T C A C T A G A G T C C G A T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:4
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:TARCACCCAGCWGWTT
-------CAGCTGTT-
 A C G T T C G A C T G A A G T C C G T A A T G C G T A C G T A C G T C A C T A G A G T C C G A T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:TARCACCCAGCWGWTT
-------CAGCTGNT-
 A C G T T C G A C T G A A G T C C G T A A T G C G T A C G T A C G T C A C T A G A G T C C G A T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:6
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TARCACCCAGCWGWTT
-----ATCAGCTGTT-
 A C G T T C G A C T G A A G T C C G T A A T G C G T A C G T A C G T C A C T A G A G T C C G A T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G C A T A T G C C G T A A T C G T A G C A C G T A C T G C G A T A C G T A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TARCACCCAGCWGWTT---
---CNGACACCTGTTCNNN
 A C G T T C G A C T G A A G T C C G T A A T G C G T A C G T A C G T C A C T A G A G T C C G A T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T A G T C A G T G C A A G T C C T G A T G A C A T G C C G A T C T A G A G C T A G C T T A G C G A C T A G C T A G T C

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:8
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:TARCACCCAGCWGWTT
------ACAGCTGTTV
 A C G T T C G A C T G A A G T C C G T A A T G C G T A C G T A C G T C A C T A G A G T C C G A T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TARCACCCAGCWGWTT
-----GCCATCTGTT-
 A C G T T C G A C T G A A G T C C G T A A T G C G T A C G T A C G T C A C T A G A G T C C G A T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TARCACCCAGCWGWTT
------NCAGCTGCTG
 A C G T T C G A C T G A A G T C C G T A A T G C G T A C G T A C G T C A C T A G A G T C C G A T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G