Information for 12-CTTRCTATCAAYCACC (Motif 29)

A G T C A C G T C G A T C T G A A G T C A C G T C G T A A G C T A G T C C G T A C G T A A G C T A G T C C G T A G T A C G A T C
Reverse Opposite:
C T A G A C T G C G A T C T A G C T G A C G A T C G A T A C T G C T G A A C G T C G T A C T A G G A C T G C T A C G T A C T A G
p-value:1e-8
log p-value:-2.012e+01
Information Content per bp:1.726
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.6 +/- 16.9bp
Average Position of motif in Background73.8 +/- 11.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTTRCTATCAAYCACC
--YSTTATCT------
 A G T C A C G T C G A T C T G A A G T C A C G T C G T A A G C T A G T C C G T A C G T A A G C T A G T C C G T A G T A C G A T C
A C G T A C G T A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T A C G T A C G T A C G T A C G T A C G T A C G T

GATA5/MA0766.1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTTRCTATCAAYCACC
--TCTTATCT------
 A G T C A C G T C G A T C T G A A G T C A C G T C G T A A G C T A G T C C G T A C G T A A G C T A G T C C G T A G T A C G A T C
A C G T A C G T A G C T A T G C G A C T C G A T C G T A A G C T A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T

GATA2/MA0036.2/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTTRCTATCAAYCACC
AGATTCTTATCTGT----
 A C G T A C G T A G T C A C G T C G A T C T G A A G T C A C G T C G T A A G C T A G T C C G T A C G T A A G C T A G T C C G T A G T A C G A T C
C G T A C T A G C T G A G C A T A G C T A T G C A G C T C G A T C G T A A C G T A G T C C G A T A T C G G C A T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CTTRCTATCAAYCACC
---NCTGTCAATCAN-
 A G T C A C G T C G A T C T G A A G T C A C G T C G T A A G C T A G T C C G T A C G T A A G C T A G T C C G T A G T A C G A T C
A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CTTRCTATCAAYCACC-
----CTGTCTGTCACCT
 A G T C A C G T C G A T C T G A A G T C A C G T C G T A A G C T A G T C C G T A C G T A A G C T A G T C C G T A G T A C G A T C A C G T
A C G T A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

PB0022.1_Gata5_1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CTTRCTATCAAYCACC
NTNTTCTTATCAGTNTN-
 A C G T A C G T A G T C A C G T C G A T C T G A A G T C A C G T C G T A A G C T A G T C C G T A C G T A A G C T A G T C C G T A G T A C G A T C
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CTTRCTATCAAYCACC
---SCTGTCAVTCAV-
 A G T C A C G T C G A T C T G A A G T C A C G T C G T A A G C T A G T C C G T A C G T A A G C T A G T C C G T A G T A C G A T C
A C G T A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T

PBX1/MA0070.1/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CTTRCTATCAAYCACC
----CCATCAATCAAA
 A G T C A C G T C G A T C T G A A G T C A C G T C G T A A G C T A G T C C G T A C G T A A G C T A G T C C G T A G T A C G A T C
A C G T A C G T A C G T A C G T G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

Gata1/MA0035.3/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTTRCTATCAAYCACC
-TTCTTATCTGT----
 A G T C A C G T C G A T C T G A A G T C A C G T C G T A A G C T A G T C C G T A C G T A A G C T A G T C C G T A G T A C G A T C
A C G T A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T A C G T A C G T A C G T A C G T

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CTTRCTATCAAYCACC
--YCTTATCWVN----
 A G T C A C G T C G A T C T G A A G T C A C G T C G T A A G C T A G T C C G T A C G T A A G C T A G T C C G T A G T A C G A T C
A C G T A C G T A G C T A T G C G A C T G C A T C G T A A C G T A G T C C G A T T A C G A T G C A C G T A C G T A C G T A C G T