Information for 8-WTRGRGRSTTKRYCCT (Motif 22)

C G T A A C G T C T G A A C T G C T G A A C T G C T G A A T G C A C G T A C G T A C G T C T G A G A C T A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G C T A G C T A G A G C T G T C A C G T A C G T A A T C G A G C T A G T C A G C T G T A C A G C T C G T A C G A T
p-value:1e-11
log p-value:-2.597e+01
Information Content per bp:1.806
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.8 +/- 21.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf4a/MA0114.3/Jaspar

Match Rank:1
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:WTRGRGRSTTKRYCCT-
-ATTGGACTTTGACCCC
 C G T A A C G T C T G A A C T G C T G A A C T G C T G A A T G C A C G T A C G T A C G T C T G A G A C T A G T C A G T C A C G T A C G T
A C G T C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:WTRGRGRSTTKRYCCT--
---TGGACTTTGNNCTCN
 C G T A A C G T C T G A A C T G C T G A A C T G C T G A A T G C A C G T A C G T A C G T C T G A G A C T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:3
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--WTRGRGRSTTKRYCCT
GGTTAGAGACCT------
 A C G T A C G T C G T A A C G T C T G A A C T G C T G A A C T G C T G A A T G C A C G T A C G T A C G T C T G A G A C T A G T C A G T C A C G T
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:WTRGRGRSTTKRYCCT---
---TGGACTTTGNNCTNTG
 C G T A A C G T C T G A A C T G C T G A A C T G C T G A A T G C A C G T A C G T A C G T C T G A G A C T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.50
Offset:2
Orientation:forward strand
Alignment:WTRGRGRSTTKRYCCT
--NGGGGATTTCCC--
 C G T A A C G T C T G A A C T G C T G A A C T G C T G A A T G C A C G T A C G T A C G T C T G A G A C T A G T C A G T C A C G T
A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:6
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:WTRGRGRSTTKRYCCT
---GGGGATTCCCCC-
 C G T A A C G T C T G A A C T G C T G A A C T G C T G A A T G C A C G T A C G T A C G T C T G A G A C T A G T C A G T C A C G T
A C G T A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:7
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:WTRGRGRSTTKRYCCT-----
----NNANTTGACCCCTNNNN
 C G T A A C G T C T G A A C T G C T G A A C T G C T G A A T G C A C G T A C G T A C G T C T G A G A C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.47
Offset:3
Orientation:forward strand
Alignment:WTRGRGRSTTKRYCCT
---GGGAATTTCC---
 C G T A A C G T C T G A A C T G C T G A A C T G C T G A A T G C A C G T A C G T A C G T C T G A G A C T A G T C A G T C A C G T
A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.47
Offset:3
Orientation:forward strand
Alignment:WTRGRGRSTTKRYCCT
---GGGGGTGTGTCC-
 C G T A A C G T C T G A A C T G C T G A A C T G C T G A A T G C A C G T A C G T A C G T C T G A G A C T A G T C A G T C A C G T
A C G T A C G T A C G T T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:10
Score:0.47
Offset:3
Orientation:forward strand
Alignment:WTRGRGRSTTKRYCCT
---GGGGATTTCC---
 C G T A A C G T C T G A A C T G C T G A A C T G C T G A A T G C A C G T A C G T A C G T C T G A G A C T A G T C A G T C A C G T
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T