Information for 5-TGTTTACYCT (Motif 2)

A G C T T C A G C G A T A C G T C A G T C T G A A T G C G A C T A G T C G C A T
Reverse Opposite:
C G T A C T A G C T G A A T C G G A C T G T C A C G T A C G T A A G T C C T G A
p-value:1e-17
log p-value:-4.033e+01
Information Content per bp:1.697
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif8.62%
Number of Background Sequences with motif981.3
Percentage of Background Sequences with motif2.16%
Average Position of motif in Targets50.1 +/- 24.4bp
Average Position of motif in Background47.7 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:1
Score:0.90
Offset:-2
Orientation:forward strand
Alignment:--TGTTTACYCT
CNTGTTTACATA
 A C G T A C G T A G C T T C A G C G A T A C G T C A G T C T G A A T G C G A C T A G T C G C A T
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:2
Score:0.90
Offset:-3
Orientation:forward strand
Alignment:---TGTTTACYCT--
BSNTGTTTACWYWGN
 A C G T A C G T A C G T A G C T T C A G C G A T A C G T C A G T C T G A A T G C G A C T A G T C G C A T A C G T A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

FOXA1/MA0148.3/Jaspar

Match Rank:3
Score:0.90
Offset:-4
Orientation:forward strand
Alignment:----TGTTTACYCT-
TCCATGTTTACTTTG
 A C G T A C G T A C G T A C G T A G C T T C A G C G A T A C G T C A G T C T G A A T G C G A C T A G T C G C A T A C G T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:TGTTTACYCT
TGTTTACTTT
 A G C T T C A G C G A T A C G T C A G T C T G A A T G C G A C T A G T C G C A T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:5
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:TGTTTACYCT
TGTTTACTTT
 A G C T T C A G C G A T A C G T C A G T C T G A A T G C G A C T A G T C G C A T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

Foxa2/MA0047.2/Jaspar

Match Rank:6
Score:0.88
Offset:0
Orientation:forward strand
Alignment:TGTTTACYCT--
TGTTTACTTAGG
 A G C T T C A G C G A T A C G T C A G T C T G A A T G C G A C T A G T C G C A T A C G T A C G T
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:7
Score:0.88
Offset:0
Orientation:forward strand
Alignment:TGTTTACYCT
TRTTTACTTW
 A G C T T C A G C G A T A C G T C A G T C T G A A T G C G A C T A G T C G C A T
A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.86
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTACYCT-----
NSTGTTTRCWCAGBNNN
 A C G T A C G T A G C T T C A G C G A T A C G T C A G T C T G A A T G C G A C T A G T C G C A T A C G T A C G T A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

FOXI1/MA0042.2/Jaspar

Match Rank:9
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:TGTTTACYCT
TGTTTAC---
 A G C T T C A G C G A T A C G T C A G T C T G A A T G C G A C T A G T C G C A T
A G C T C T A G G C A T A C G T A C G T C G T A A G T C A C G T A C G T A C G T

FOXO6/MA0849.1/Jaspar

Match Rank:10
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:TGTTTACYCT
TGTTTAC---
 A G C T T C A G C G A T A C G T C A G T C T G A A T G C G A C T A G T C G C A T
A G C T T C A G A C G T C A G T A C G T G C T A A G T C A C G T A C G T A C G T