Information for 5-CCVTCACATTCACATT (Motif 19)

A T G C A G T C T C G A C G A T A G T C C G T A A G T C G T C A C G A T A C G T A G T C G T C A A G T C G T C A G C A T A C G T
Reverse Opposite:
C G T A C G T A A C G T C T A G A C G T A C T G C G T A C G T A A C G T A C T G C G A T A C T G C G T A A C G T C T A G A T C G
p-value:1e-11
log p-value:-2.597e+01
Information Content per bp:1.756
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.8 +/- 24.6bp
Average Position of motif in Background22.5 +/- 4.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.1/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CCVTCACATTCACATT--
---TCACTTTCACTTTCN
 A T G C A G T C T C G A C G A T A G T C C G T A A G T C G T C A C G A T A C G T A G T C G T C A A G T C G T C A G C A T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCVTCACATTCACATT--
-GACCACATTCATACAAT
 A T G C A G T C T C G A C G A T A G T C C G T A A G T C G T C A C G A T A C G T A G T C G T C A A G T C G T C A G C A T A C G T A C G T A C G T
A C G T T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

TEAD1/MA0090.2/Jaspar

Match Rank:3
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CCVTCACATTCACATT
----CACATTCCAT--
 A T G C A G T C T C G A C G A T A G T C C G T A A G T C G T C A C G A T A C G T A G T C G T C A A G T C G T C A G C A T A C G T
A C G T A C G T A C G T A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CCVTCACATTCACATT-
-----ACTTTCACTTTC
 A T G C A G T C T C G A C G A T A G T C C G T A A G T C G T C A C G A T A C G T A G T C G T C A A G T C G T C A G C A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

TEAD4/MA0809.1/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CCVTCACATTCACATT
----CACATTCCAT--
 A T G C A G T C T C G A C G A T A G T C C G T A A G T C G T C A C G A T A C G T A G T C G T C A A G T C G T C A G C A T A C G T
A C G T A C G T A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CCVTCACATTCACATT---
-----ACATTCATGACACG
 A T G C A G T C T C G A C G A T A G T C C G T A A G T C G T C A C G A T A C G T A G T C G T C A A G T C G T C A G C A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

Sox1/MA0870.1/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CCVTCACATTCACATT---
----AACAATAACATTGTT
 A T G C A G T C T C G A C G A T A G T C C G T A A G T C G T C A C G A T A C G T A G T C G T C A A G T C G T C A G C A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T

IRF1/MA0050.2/Jaspar

Match Rank:8
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CCVTCACATTCACATT
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C G T A C G T A C G T A T G C A G T C T C G A C G A T A G T C C G T A A G T C G T C A C G A T A C G T A G T C G T C A A G T C G T C A G C A T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

PB0117.1_Eomes_2/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CCVTCACATTCACATT
NNGGCGACACCTCNNN---
 A C G T A C G T A C G T A T G C A G T C T C G A C G A T A G T C C G T A A G T C G T C A C G A T A C G T A G T C G T C A A G T C G T C A G C A T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C A C G T A C G T A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CCVTCACATTCACATT
-----ACATTCCA---
 A T G C A G T C T C G A C G A T A G T C C G T A A G T C G T C A C G A T A C G T A G T C G T C A A G T C G T C A G C A T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A A C G T A C G T A C G T