p-value: | 1e-11 |
log p-value: | -2.597e+01 |
Information Content per bp: | 1.875 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.76% |
Number of Background Sequences with motif | 1.9 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 58.4 +/- 24.9bp |
Average Position of motif in Background | 51.0 +/- 13.1bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.68 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GGCAGACAGTAAT -CCAGACAG---- |
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HOXA5/MA0158.1/Jaspar
Match Rank: | 2 |
Score: | 0.65 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | GGCAGACAGTAAT- ------CACTAATT |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 3 |
Score: | 0.64 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GGCAGACAGTAAT CAAATCCAGACATCACA |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 4 |
Score: | 0.64 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GGCAGACAGTAAT -CCAGACRSVB-- |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 5 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GGCAGACAGTAAT -BCAGACWA---- |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 6 |
Score: | 0.61 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GGCAGACAGTAAT AGGTGNCAGACAG---- |
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Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 7 |
Score: | 0.59 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GGCAGACAGTAAT AGGTGHCAGACA----- |
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Hoxd8/MA0910.1/Jaspar
Match Rank: | 8 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GGCAGACAGTAAT------ --NAGCCATTAATTANTTA |
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PH0080.1_Hoxd8/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GGCAGACAGTAAT------ --NAGCCATTAATTANTTA |
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PB0141.1_Isgf3g_2/Jaspar
Match Rank: | 10 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGCAGACAGTAAT- GCAAAACATTACTA |
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