Information for 3-TGTTGACCTGGTGATA (Motif 9)

C G A T A T C G G A C T C G A T C A T G C G T A T A G C G T A C A G C T C T A G T A C G C G A T A C T G G T C A A C G T C G T A
Reverse Opposite:
C G A T C G T A A C G T T A G C G C T A A T G C G A T C C T G A C A T G A T C G G C A T G T A C C G T A C T G A T A G C C G T A
p-value:1e-15
log p-value:-3.630e+01
Information Content per bp:1.654
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.12%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets52.1 +/- 25.0bp
Average Position of motif in Background53.2 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORA(var.2)/MA0072.1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGTTGACCTGGTGATA
--TTGACCTANTTATN
 C G A T A T C G G A C T C G A T C A T G C G T A T A G C G T A C A G C T C T A G T A C G C G A T A C T G G T C A A C G T C G T A
A C G T A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:2
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TGTTGACCTGGTGATA
SCHTGTTTACAT-------
 A C G T A C G T A C G T C G A T A T C G G A C T C G A T C A T G C G T A T A G C G T A C A G C T C T A G T A C G C G A T A C T G G T C A A C G T C G T A
T A C G T A G C G C T A C G A T C T A G A C G T C A G T C A G T G C T A A G T C G T C A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGTTGACCTGGTGATA
BSNTGTTTACWYWGN----
 A C G T A C G T A C G T C G A T A T C G G A C T C G A T C A T G C G T A T A G C G T A C A G C T C T A G T A C G C G A T A C T G G T C A A C G T C G T A
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G A C G T A C G T A C G T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGTTGACCTGGTGATA
TGTTTACTTAGG----
 C G A T A T C G G A C T C G A T C A T G C G T A T A G C G T A C A G C T C T A G T A C G C G A T A C T G G T C A A C G T C G T A
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G A C G T A C G T A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TGTTGACCTGGTGATA
CNTGTTTACATA------
 A C G T A C G T C G A T A T C G G A C T C G A T C A T G C G T A T A G C G T A C A G C T C T A G T A C G C G A T A C T G G T C A A C G T C G T A
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGTTGACCTGGTGATA
GGTTGCCATGGCAA--
 C G A T A T C G G A C T C G A T C A T G C G T A T A G C G T A C A G C T C T A G T A C G C G A T A C T G G T C A A C G T C G T A
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TGTTGACCTGGTGATA
TTTGTTTACTTA------
 A C G T A C G T C G A T A T C G G A C T C G A T C A T G C G T A T A G C G T A C A G C T C T A G T A C G C G A T A C T G G T C A A C G T C G T A
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T

FOXO6/MA0849.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGTTGACCTGGTGATA
TGTTTAC---------
 C G A T A T C G G A C T C G A T C A T G C G T A T A G C G T A C A G C T C T A G T A C G C G A T A C T G G T C A A C G T C G T A
A G C T T C A G A C G T C A G T A C G T G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GATA5/MA0766.1/Jaspar

Match Rank:9
Score:0.53
Offset:11
Orientation:forward strand
Alignment:TGTTGACCTGGTGATA---
-----------AGATAAGA
 C G A T A T C G G A C T C G A T C A T G C G T A T A G C G T A C A G C T C T A G T A C G C G A T A C T G G T C A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A

FOXO4/MA0848.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGTTGACCTGGTGATA
TGTTTAC---------
 C G A T A T C G G A C T C G A T C A T G C G T A T A G C G T A C A G C T C T A G T A C G C G A T A C T G G T C A A C G T C G T A
C G A T C T A G G A C T C A G T A C G T G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T