Information for 25-AACTTGACAC (Motif 32)

C G T A C G T A A G T C A C G T A C G T A C T G C G T A A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C G T A G T C C G T A C G T A A C T G A C G T A C G T
p-value:1e-5
log p-value:-1.271e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.5 +/- 30.3bp
Average Position of motif in Background71.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:AACTTGACAC
-ARNTGACA-
 C G T A C G T A A G T C A C G T A C G T A C T G C G T A A G T C C G T A A G T C
A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AACTTGACAC
GWAAYHTGABMC
 A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C T G C G T A A G T C C G T A A G T C
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.70
Offset:3
Orientation:forward strand
Alignment:AACTTGACAC
---TTGACAG
 C G T A C G T A A G T C A C G T A C G T A C T G C G T A A G T C C G T A A G T C
A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.70
Offset:3
Orientation:forward strand
Alignment:AACTTGACAC-
---TTGACAGG
 C G T A C G T A A G T C A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T
A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AACTTGACAC------
ATAAATGACACCTATCA
 A C G T C G T A C G T A A G T C A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.67
Offset:3
Orientation:forward strand
Alignment:AACTTGACAC-
---TTGACAGC
 C G T A C G T A A G T C A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T
A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AACTTGACAC
GWAAYHTGAKMC
 A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C T G C G T A A G T C C G T A A G T C
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:8
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:AACTTGACAC--
--KTTCACACCT
 C G T A C G T A A G T C A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T A C G T
A C G T A C G T C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T

TBX2/MA0688.1/Jaspar

Match Rank:9
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:AACTTGACAC---
--TTTCACACCTN
 C G T A C G T A A G T C A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AACTTGACAC-
-NNTTGGCANN
 C G T A C G T A A G T C A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T
A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C