Information for 3-WGATWATCTRKAT (Motif 3)

C G T A A C T G G T C A A C G T C G T A C G T A A C G T A T G C C G A T C T A G A C T G C T G A A C G T
Reverse Opposite:
C G T A A G C T G T A C A G T C G C T A A T C G C G T A C G A T C G A T C G T A A C G T A G T C G C A T
p-value:1e-25
log p-value:-5.849e+01
Information Content per bp:1.771
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.87%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets46.1 +/- 27.9bp
Average Position of motif in Background82.6 +/- 14.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0017.1_Cux1_2/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---WGATWATCTRKAT
TAATGATGATCACTA-
 A C G T A C G T A C G T C G T A A C T G G T C A A C G T C G T A C G T A A C G T A T G C C G A T C T A G A C T G C T G A A C G T
C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A A C G T

PB0023.1_Gata6_1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---WGATWATCTRKAT-
NNANTCTTATCTNNNNN
 A C G T A C G T A C G T C G T A A C T G G T C A A C G T C G T A C G T A A C G T A T G C C G A T C T A G A C T G C T G A A C G T A C G T
A G T C C G T A G C T A G A C T A C G T A T G C C G A T C G A T C T G A C G A T G T A C C G A T G T A C A C G T G C T A C A G T G C T A

PB0185.1_Tcf1_2/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:WGATWATCTRKAT--
-NNTAATCCNGNCNN
 C G T A A C T G G T C A A C G T C G T A C G T A A C G T A T G C C G A T C T A G A C T G C T G A A C G T A C G T A C G T
A C G T G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:WGATWATCTRKAT
-YCTTATCWVN--
 C G T A A C T G G T C A A C G T C G T A C G T A A C G T A T G C C G A T C T A G A C T G C T G A A C G T
A C G T A G C T A T G C G A C T G C A T C G T A A C G T A G T C C G A T T A C G A T G C A C G T A C G T

GATA5/MA0766.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:WGATWATCTRKAT
-TCTTATCT----
 C G T A A C T G G T C A A C G T C G T A C G T A A C G T A T G C C G A T C T A G A C T G C T G A A C G T
A C G T A G C T A T G C G A C T C G A T C G T A A G C T A G T C C G A T A C G T A C G T A C G T A C G T

CUX2/MA0755.1/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:WGATWATCTRKAT
---TAATCGATAA
 C G T A A C T G G T C A A C G T C G T A C G T A A C G T A T G C C G A T C T A G A C T G C T G A A C G T
A C G T A C G T A C G T G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A

CUX1/MA0754.1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:WGATWATCTRKAT
---TAATCGATAA
 C G T A A C T G G T C A A C G T C G T A C G T A A C G T A T G C C G A T C T A G A C T G C T G A A C G T
A C G T A C G T A C G T G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:WGATWATCTRKAT
-GCTAATCC----
 C G T A A C T G G T C A A C G T C G T A C G T A A C G T A T G C C G A T C T A G A C T G C T G A A C G T
A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---WGATWATCTRKAT-
NTNTTCTTATCAGTNTN
 A C G T A C G T A C G T C G T A A C T G G T C A A C G T C G T A C G T A A C G T A T G C C G A T C T A G A C T G C T G A A C G T A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:WGATWATCTRKAT
-YCTTATCTBN--
 C G T A A C T G G T C A A C G T C G T A C G T A A C G T A T G C C G A T C T A G A C T G C T G A A C G T
A C G T A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C A C G T A C G T