Information for 18-ACTGCAGGAC (Motif 24)

G T C A A G T C A C G T A C T G A G T C C G T A A C T G C T A G C T G A A G T C
Reverse Opposite:
A C T G A G C T A G T C A G T C A C G T A C T G G T A C G T C A A C T G A C G T
p-value:1e-9
log p-value:-2.096e+01
Information Content per bp:1.891
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.27%
Number of Background Sequences with motif19.4
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets46.4 +/- 18.4bp
Average Position of motif in Background48.1 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------ACTGCAGGAC-
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C A C G T A C T G A G T C C G T A A C T G C T A G C T G A A G T C A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ACTGCAGGAC-
CACAGCAGGGGG
 A C G T G T C A A G T C A C G T A C T G A G T C C G T A A C T G C T A G C T G A A G T C A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ACTGCAGGAC---
DCHCAGCAGGRGGCC
 A C G T A C G T G T C A A G T C A C G T A C T G A G T C C G T A A C T G C T A G C T G A A G T C A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ACTGCAGGAC-
GAGCACAGCAGGACA
 A C G T A C G T A C G T A C G T G T C A A G T C A C G T A C T G A G T C C G T A A C T G C T A G C T G A A G T C A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ACTGCAGGAC-
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T G T C A A G T C A C G T A C T G A G T C C G T A A C T G C T A G C T G A A G T C A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ACTGCAGGAC
DCTCAGCAGG--
 A C G T A C G T G T C A A G T C A C G T A C T G A G T C C G T A A C T G C T A G C T G A A G T C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ACTGCAGGAC-
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T G T C A A G T C A C G T A C T G A G T C C G T A A C T G C T A G C T G A A G T C A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ACTGCAGGAC--
TCACCTCTGGGCAG
 A C G T A C G T G T C A A G T C A C G T A C T G A G T C C G T A A C T G C T A G C T G A A G T C A C G T A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:9
Score:0.56
Offset:-8
Orientation:reverse strand
Alignment:--------ACTGCAGGAC-
NNGAGGTTACTNNAGGTCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C A C G T A C T G A G T C C G T A A C T G C T A G C T G A A G T C A C G T
T G A C G T C A T C A G T C G A C A T G C A T G A G C T G A C T G C T A G A T C G A C T G A C T A G C T T C G A C T A G C A T G C A G T A G T C T C G A

CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.54
Offset:-14
Orientation:reverse strand
Alignment:--------------ACTGCAGGAC
TGGCCANNNNNGGAACTGCA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C A C G T A C T G A G T C C G T A A C T G C T A G C T G A A G T C
G C A T C T A G C A T G G A T C G A T C C T G A G A T C G C A T A C T G A G C T C A G T C T A G C A T G G C T A C G T A A G T C C G A T C T A G A T G C G C T A A C G T A C G T A C G T A C G T