Information for 19-GCAGSTATCTCCC (Motif 23)

A T C G A T G C C G T A A C T G T A G C C G A T G T C A C A G T G T A C C G A T A T G C A G T C A G T C
Reverse Opposite:
C T A G C T A G A T C G G C T A A C T G G T C A A C G T C G T A A T C G A G T C C G A T A T C G A T G C
p-value:1e-10
log p-value:-2.417e+01
Information Content per bp:1.771
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets46.3 +/- 27.8bp
Average Position of motif in Background50.7 +/- 6.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCAGSTATCTCCC--
NNNCTGATATCTCNNNN
 A C G T A C G T A T C G A T G C C G T A A C T G T A G C C G A T G T C A C A G T G T A C C G A T A T G C A G T C A G T C A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.55
Offset:7
Orientation:forward strand
Alignment:GCAGSTATCTCCC
-------GCTCCG
 A T C G A T G C C G T A A C T G T A G C C G A T G T C A C A G T G T A C C G A T A T G C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCAGSTATCTCCC
VCAGGTRDRY---
 A T C G A T G C C G T A A C T G T A G C C G A T G T C A C A G T G T A C C G A T A T G C A G T C A G T C
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:4
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GCAGSTATCTCCC
---GGTCCCGCCC
 A T C G A T G C C G T A A C T G T A G C C G A T G T C A C A G T G T A C C G A T A T G C A G T C A G T C
A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GCAGSTATCTCCC
---GGAAATTCCC
 A T C G A T G C C G T A A C T G T A G C C G A T G T C A C A G T G T A C C G A T A T G C A G T C A G T C
A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

MZF1/MA0056.1/Jaspar

Match Rank:6
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:GCAGSTATCTCCC--
---------TCCCCA
 A T C G A T G C C G T A A C T G T A G C C G A T G T C A C A G T G T A C C G A T A T G C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

MF0003.1_REL_class/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GCAGSTATCTCCC
---GGAAATCCCC
 A T C G A T G C C G T A A C T G T A G C C G A T G T C A C A G T G T A C C G A T A T G C A G T C A G T C
A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCAGSTATCTCCC
-CAGCTGTTTCCT
 A T C G A T G C C G T A A C T G T A G C C G A T G T C A C A G T G T A C C G A T A T G C A G T C A G T C
A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T

RELA/MA0107.1/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GCAGSTATCTCCC
---GGAAATTCCC
 A T C G A T G C C G T A A C T G T A G C C G A T G T C A C A G T G T A C C G A T A T G C A G T C A G T C
A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GCAGSTATCTCCC
TGCAGCTGTCCCT-
 A C G T A T C G A T G C C G T A A C T G T A G C C G A T G T C A C A G T G T A C C G A T A T G C A G T C A G T C
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T