Information for 16-TAAATCCTCACTA (Motif 20)

G C A T C G T A C G T A G T C A C G A T A T G C G T A C C G A T A G T C G C T A G A T C A C G T C G T A
Reverse Opposite:
A C G T G T C A C T A G C G A T C T A G C G T A C A T G A T C G C G T A C A G T C G A T C G A T C G T A
p-value:1e-10
log p-value:-2.517e+01
Information Content per bp:1.735
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.9 +/- 27.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0129.1_Otx1/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TAAATCCTCACTA
NNNAATTAATCCCCNCN-
 A C G T A C G T A C G T A C G T A C G T G C A T C G T A C G T A G T C A C G A T A T G C G T A C C G A T A G T C G C T A G A T C A C G T C G T A
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TAAATCCTCACTA
GNNNATTAATCCCTNCN-
 A C G T A C G T A C G T A C G T A C G T G C A T C G T A C G T A G T C A C G A T A T G C G T A C C G A T A G T C G C T A G A T C A C G T C G T A
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A A C G T

PH0130.1_Otx2/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TAAATCCTCACTA
GANNATTAATCCCTNNN-
 A C G T A C G T A C G T A C G T A C G T G C A T C G T A C G T A G T C A C G A T A T G C G T A C C G A T A G T C G C T A G A T C A C G T C G T A
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TAAATCCTCACTA
TCCAATCCACA---
 A C G T G C A T C G T A C G T A G T C A C G A T A T G C G T A C C G A T A G T C G C T A G A T C A C G T C G T A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TAAATCCTCACTA
NTTGTTAATCCCTCTNN
 A C G T A C G T A C G T A C G T G C A T C G T A C G T A G T C A C G A T A T G C G T A C C G A T A G T C G C T A G A T C A C G T C G T A
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TAAATCCTCACTA
NYTAATCCYB----
 A C G T G C A T C G T A C G T A G T C A C G A T A T G C G T A C C G A T A G T C G C T A G A T C A C G T C G T A
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T A C G T A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TAAATCCTCACTA
NNNATTAATCCGNTTNA
 A C G T A C G T A C G T A C G T G C A T C G T A C G T A G T C A C G A T A T G C G T A C C G A T A G T C G C T A G A T C A C G T C G T A
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TAAATCCTCACTA
NNNATTAATCCGNTTNA
 A C G T A C G T A C G T A C G T G C A T C G T A C G T A G T C A C G A T A T G C G T A C C G A T A G T C G C T A G A T C A C G T C G T A
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TAAATCCTCACTA
SSAATCCACANN-
 G C A T C G T A C G T A G T C A C G A T A T G C G T A C C G A T A G T C G C T A G A T C A C G T C G T A
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T

Crx/MA0467.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TAAATCCTCACTA
CTAATCCTCTT--
 G C A T C G T A C G T A G T C A C G A T A T G C G T A C C G A T A G T C G C T A G A T C A C G T C G T A
G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T A C G T A C G T