Information for 9-GAGACAACCA (Motif 13)

A C T G C T G A A C T G C G T A A T G C C G T A C G T A G T A C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G C G A T A C G T A T C G A C G T A G T C A G C T A G T C
p-value:1e-13
log p-value:-3.174e+01
Information Content per bp:1.910
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.66%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets46.2 +/- 26.9bp
Average Position of motif in Background50.6 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GAGACAACCA----
CATAAGACCACCATTAC
 A C G T A C G T A C G T A C T G C T G A A C T G C G T A A T G C C G T A C G T A G T A C A G T C C G T A A C G T A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

Dux/MA0611.1/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GAGACAACCA-
---CCAATCAA
 A C T G C T G A A C T G C G T A A T G C C G T A C G T A G T A C A G T C C G T A A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

GATA2/MA0036.2/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GAGACAACCA---
NCAGATAAGAANNN
 A C G T A C T G C T G A A C T G C G T A A T G C C G T A C G T A G T A C A G T C C G T A A C G T A C G T A C G T
C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GAGACAACCA
BCAGACWA---
 A C G T A C T G C T G A A C T G C G T A A T G C C G T A C G T A G T A C A G T C C G T A
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAGACAACCA
NAGATAAGNN
 A C T G C T G A A C T G C G T A A T G C C G T A C G T A G T A C A G T C C G T A
T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GAGACAACCA---
AAACAGACAAAGGAAT
 A C G T A C G T A C G T A C T G C T G A A C T G C G T A A T G C C G T A C G T A G T A C A G T C C G T A A C G T A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

MF0005.1_Forkhead_class/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GAGACAACCA
-AAATAAACA
 A C T G C T G A A C T G C G T A A T G C C G T A C G T A G T A C A G T C C G T A
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAGACAACCA
CCAGACAG---
 A C G T A C T G C T G A A C T G C G T A A T G C C G T A C G T A G T A C A G T C C G T A
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GAGACAACCA---
-AAACAAACATTC
 A C T G C T G A A C T G C G T A A T G C C G T A C G T A G T A C A G T C C G T A A C G T A C G T A C G T
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

Gata1/MA0035.3/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAGACAACCA
ANAGATAAGAA
 A C G T A C T G C T G A A C T G C G T A A T G C C G T A C G T A G T A C A G T C C G T A
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A