Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-236 | -5.449e+02 | 0.0000 | 443.0 | 66.02% | 5476.9 | 11.91% | motif file (matrix) |
svg |
2 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-235 | -5.418e+02 | 0.0000 | 384.0 | 57.23% | 3652.6 | 7.94% | motif file (matrix) |
svg |
3 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-232 | -5.359e+02 | 0.0000 | 370.0 | 55.14% | 3330.4 | 7.24% | motif file (matrix) |
svg |
4 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-229 | -5.295e+02 | 0.0000 | 316.0 | 47.09% | 2113.7 | 4.60% | motif file (matrix) |
svg |
5 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-226 | -5.220e+02 | 0.0000 | 325.0 | 48.44% | 2360.0 | 5.13% | motif file (matrix) |
svg |
6 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-28 | -6.597e+01 | 0.0000 | 236.0 | 35.17% | 7875.1 | 17.13% | motif file (matrix) |
svg |
7 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-24 | -5.710e+01 | 0.0000 | 189.0 | 28.17% | 5958.2 | 12.96% | motif file (matrix) |
svg |
8 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-18 | -4.324e+01 | 0.0000 | 76.0 | 11.33% | 1563.1 | 3.40% | motif file (matrix) |
svg |
9 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-18 | -4.157e+01 | 0.0000 | 129.0 | 19.23% | 3855.7 | 8.38% | motif file (matrix) |
svg |
10 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-15 | -3.670e+01 | 0.0000 | 86.0 | 12.82% | 2169.0 | 4.72% | motif file (matrix) |
svg |
11 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-15 | -3.494e+01 | 0.0000 | 41.0 | 6.11% | 590.9 | 1.29% | motif file (matrix) |
svg |
12 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-14 | -3.452e+01 | 0.0000 | 81.0 | 12.07% | 2043.8 | 4.44% | motif file (matrix) |
svg |
13 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-14 | -3.259e+01 | 0.0000 | 287.0 | 42.77% | 13218.3 | 28.74% | motif file (matrix) |
svg |
14 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-14 | -3.257e+01 | 0.0000 | 92.0 | 13.71% | 2595.5 | 5.64% | motif file (matrix) |
svg |
15 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-13 | -3.134e+01 | 0.0000 | 87.0 | 12.97% | 2429.8 | 5.28% | motif file (matrix) |
svg |
16 |
| GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer | 1e-13 | -3.021e+01 | 0.0000 | 27.0 | 4.02% | 288.6 | 0.63% | motif file (matrix) |
svg |
17 |
| Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer | 1e-12 | -2.928e+01 | 0.0000 | 110.0 | 16.39% | 3596.6 | 7.82% | motif file (matrix) |
svg |
18 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-12 | -2.778e+01 | 0.0000 | 45.0 | 6.71% | 874.0 | 1.90% | motif file (matrix) |
svg |
19 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-11 | -2.760e+01 | 0.0000 | 56.0 | 8.35% | 1286.6 | 2.80% | motif file (matrix) |
svg |
20 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-11 | -2.714e+01 | 0.0000 | 110.0 | 16.39% | 3722.9 | 8.10% | motif file (matrix) |
svg |
21 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-11 | -2.629e+01 | 0.0000 | 49.0 | 7.30% | 1061.7 | 2.31% | motif file (matrix) |
svg |
22 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-11 | -2.610e+01 | 0.0000 | 64.0 | 9.54% | 1663.4 | 3.62% | motif file (matrix) |
svg |
23 |
| GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-11 | -2.588e+01 | 0.0000 | 25.0 | 3.73% | 296.5 | 0.64% | motif file (matrix) |
svg |
24 |
| Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer | 1e-10 | -2.521e+01 | 0.0000 | 81.0 | 12.07% | 2449.4 | 5.33% | motif file (matrix) |
svg |
25 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-10 | -2.475e+01 | 0.0000 | 100.0 | 14.90% | 3376.8 | 7.34% | motif file (matrix) |
svg |
26 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-9 | -2.244e+01 | 0.0000 | 94.0 | 14.01% | 3224.9 | 7.01% | motif file (matrix) |
svg |
27 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-9 | -2.144e+01 | 0.0000 | 69.0 | 10.28% | 2092.5 | 4.55% | motif file (matrix) |
svg |
28 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-9 | -2.120e+01 | 0.0000 | 55.0 | 8.20% | 1485.6 | 3.23% | motif file (matrix) |
svg |
29 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-9 | -2.083e+01 | 0.0000 | 65.0 | 9.69% | 1941.2 | 4.22% | motif file (matrix) |
svg |
30 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-8 | -1.953e+01 | 0.0000 | 177.0 | 26.38% | 7976.2 | 17.35% | motif file (matrix) |
svg |
31 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-7 | -1.777e+01 | 0.0000 | 47.0 | 7.00% | 1291.2 | 2.81% | motif file (matrix) |
svg |
32 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-6 | -1.537e+01 | 0.0000 | 50.0 | 7.45% | 1540.0 | 3.35% | motif file (matrix) |
svg |
33 |
| Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer | 1e-6 | -1.522e+01 | 0.0000 | 24.0 | 3.58% | 473.5 | 1.03% | motif file (matrix) |
svg |
34 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-6 | -1.508e+01 | 0.0000 | 35.0 | 5.22% | 899.6 | 1.96% | motif file (matrix) |
svg |
35 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-6 | -1.453e+01 | 0.0000 | 55.0 | 8.20% | 1820.8 | 3.96% | motif file (matrix) |
svg |
36 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-6 | -1.416e+01 | 0.0000 | 51.0 | 7.60% | 1652.3 | 3.59% | motif file (matrix) |
svg |
37 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-6 | -1.398e+01 | 0.0000 | 101.0 | 15.05% | 4240.0 | 9.22% | motif file (matrix) |
svg |
38 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-5 | -1.356e+01 | 0.0000 | 64.0 | 9.54% | 2324.5 | 5.05% | motif file (matrix) |
svg |
39 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-5 | -1.261e+01 | 0.0000 | 109.0 | 16.24% | 4824.3 | 10.49% | motif file (matrix) |
svg |
40 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-4 | -1.064e+01 | 0.0002 | 47.0 | 7.00% | 1681.7 | 3.66% | motif file (matrix) |
svg |
41 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-4 | -1.038e+01 | 0.0003 | 30.0 | 4.47% | 892.4 | 1.94% | motif file (matrix) |
svg |
42 |
| Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer | 1e-4 | -1.017e+01 | 0.0003 | 16.0 | 2.38% | 328.0 | 0.71% | motif file (matrix) |
svg |
43 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-4 | -9.249e+00 | 0.0008 | 45.0 | 6.71% | 1681.2 | 3.66% | motif file (matrix) |
svg |
44 |
| E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer | 1e-3 | -8.023e+00 | 0.0027 | 63.0 | 9.39% | 2749.8 | 5.98% | motif file (matrix) |
svg |
45 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -7.959e+00 | 0.0028 | 34.0 | 5.07% | 1223.1 | 2.66% | motif file (matrix) |
svg |
46 |
| GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-3 | -7.764e+00 | 0.0034 | 12.0 | 1.79% | 252.4 | 0.55% | motif file (matrix) |
svg |
47 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-3 | -7.176e+00 | 0.0059 | 28.0 | 4.17% | 981.9 | 2.14% | motif file (matrix) |
svg |
48 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -6.884e+00 | 0.0078 | 17.0 | 2.53% | 486.1 | 1.06% | motif file (matrix) |
svg |
49 |
| Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer | 1e-2 | -6.741e+00 | 0.0088 | 37.0 | 5.51% | 1470.3 | 3.20% | motif file (matrix) |
svg |
50 |
| Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer | 1e-2 | -6.113e+00 | 0.0161 | 5.0 | 0.75% | 61.0 | 0.13% | motif file (matrix) |
svg |
51 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-2 | -6.034e+00 | 0.0171 | 64.0 | 9.54% | 3042.1 | 6.62% | motif file (matrix) |
svg |
52 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-2 | -6.007e+00 | 0.0172 | 77.0 | 11.48% | 3805.3 | 8.28% | motif file (matrix) |
svg |
53 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-2 | -5.756e+00 | 0.0217 | 36.0 | 5.37% | 1506.3 | 3.28% | motif file (matrix) |
svg |
54 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-2 | -5.673e+00 | 0.0232 | 44.0 | 6.56% | 1952.4 | 4.25% | motif file (matrix) |
svg |
55 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-2 | -5.420e+00 | 0.0293 | 145.0 | 21.61% | 8092.5 | 17.60% | motif file (matrix) |
svg |
56 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-2 | -5.214e+00 | 0.0354 | 53.0 | 7.90% | 2517.2 | 5.47% | motif file (matrix) |
svg |
57 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.161e+00 | 0.0366 | 10.0 | 1.49% | 261.1 | 0.57% | motif file (matrix) |
svg |
58 |
| Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer | 1e-2 | -5.129e+00 | 0.0372 | 25.0 | 3.73% | 980.5 | 2.13% | motif file (matrix) |
svg |
59 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.127e+00 | 0.0372 | 50.0 | 7.45% | 2356.6 | 5.12% | motif file (matrix) |
svg |
60 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.093e+00 | 0.0373 | 25.0 | 3.73% | 983.1 | 2.14% | motif file (matrix) |
svg |
61 |
| MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer | 1e-2 | -5.071e+00 | 0.0374 | 35.0 | 5.22% | 1520.3 | 3.31% | motif file (matrix) |
svg |
62 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-2 | -5.032e+00 | 0.0383 | 61.0 | 9.09% | 3008.2 | 6.54% | motif file (matrix) |
svg |
63 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-2 | -4.814e+00 | 0.0469 | 143.0 | 21.31% | 8106.4 | 17.63% | motif file (matrix) |
svg |
64 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-2 | -4.768e+00 | 0.0483 | 22.0 | 3.28% | 854.7 | 1.86% | motif file (matrix) |
svg |
65 |
| EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer | 1e-2 | -4.730e+00 | 0.0495 | 33.0 | 4.92% | 1446.2 | 3.14% | motif file (matrix) |
svg |
66 |
| E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.647e+00 | 0.0529 | 17.0 | 2.53% | 610.2 | 1.33% | motif file (matrix) |
svg |