Information for 3-AGATAGCACWGWSCAA (Motif 6)

C G T A A C T G C G T A A C G T C G T A A C T G A G T C C G T A G T A C G C T A A C T G C G T A A T C G A G T C C G T A C T G A
Reverse Opposite:
A G C T A C G T A C T G T A C G G C A T G T A C C G A T A C T G A C G T A C T G A G T C A C G T C G T A A C G T A G T C A C G T
p-value:1e-12
log p-value:-2.849e+01
Information Content per bp:1.890
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.6 +/- 17.1bp
Average Position of motif in Background37.9 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----AGATAGCACWGWSCAA
GACAGAGATATCAGTGT----
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A A C T G A G T C C G T A G T A C G C T A A C T G C G T A A T C G A G T C C G T A C T G A
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGATAGCACWGWSCAA
AGATAASR--------
 C G T A A C T G C G T A A C G T C G T A A C T G A G T C C G T A G T A C G C T A A C T G C G T A A T C G A G T C C G T A C T G A
G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGATAGCACWGWSCAA
NNNNTGAGCACTGTNNG-
 A C G T A C G T C G T A A C T G C G T A A C G T C G T A A C T G A G T C C G T A G T A C G C T A A C T G C G T A A T C G A G T C C G T A C T G A
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T

GATA5/MA0766.1/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGATAGCACWGWSCAA
AGATAAGA--------
 C G T A A C T G C G T A A C G T C G T A A C T G A G T C C G T A G T A C G C T A A C T G C G T A A T C G A G T C C G T A C T G A
G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGATAGCACWGWSCAA
CANAGNNCAAAGTCCA-
 A C G T C G T A A C T G C G T A A C G T C G T A A C T G A G T C C G T A G T A C G C T A A C T G C G T A A T C G A G T C C G T A C T G A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGATAGCACWGWSCAA
AGAGTCCAAAGTCCA-
 C G T A A C T G C G T A A C G T C G T A A C T G A G T C C G T A G T A C G C T A A C T G C G T A A T C G A G T C C G T A C T G A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T

GATA3/MA0037.2/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGATAGCACWGWSCAA
AGATAAGA--------
 C G T A A C T G C G T A A C G T C G T A A C T G A G T C C G T A G T A C G C T A A C T G C G T A A T C G A G T C C G T A C T G A
C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GATA2/MA0036.2/Jaspar

Match Rank:8
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--AGATAGCACWGWSCAA
NCAGATAAGAANNN----
 A C G T A C G T C G T A A C T G C G T A A C G T C G T A A C T G A G T C C G T A G T A C G C T A A C T G C G T A A T C G A G T C C G T A C T G A
C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T A C G T A C G T A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:9
Score:0.49
Offset:3
Orientation:forward strand
Alignment:AGATAGCACWGWSCAA-
---TGGCACCATGCCAA
 C G T A A C T G C G T A A C G T C G T A A C T G A G T C C G T A G T A C G C T A A C T G C G T A A T C G A G T C C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

Gata4/MA0482.1/Jaspar

Match Rank:10
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---AGATAGCACWGWSCAA
NNGAGATAAGA--------
 A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A A C T G A G T C C G T A G T A C G C T A A C T G C G T A A T C G A G T C C G T A C T G A
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T