Information for 2-AGGDGACTTTAHKCTG (Motif 5)

C G T A C A T G A C T G C A G T C T A G C G T A A G T C C G A T A G C T C G A T T C G A G A C T A C T G G T A C C G A T C T A G
Reverse Opposite:
A G T C C G T A A C T G T G A C C G T A A G C T C G T A C T G A C G T A C T A G G C A T A G T C G T C A G T A C G T A C C G A T
p-value:1e-13
log p-value:-3.079e+01
Information Content per bp:1.666
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.79%
Number of Background Sequences with motif29.6
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets36.2 +/- 22.7bp
Average Position of motif in Background48.0 +/- 36.8bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGGDGACTTTAHKCTG
NNATTGGACTTTNGNN--
 A C G T A C G T C G T A C A T G A C T G C A G T C T A G C G T A A G T C C G A T A G C T C G A T T C G A G A C T A C T G G T A C C G A T C T A G
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGGDGACTTTAHKCTG
--TTGACTTTT-----
 C G T A C A T G A C T G C A G T C T A G C G T A A G T C C G A T A G C T C G A T T C G A G A C T A C T G G T A C C G A T C T A G
A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGGDGACTTTAHKCTG
ATTGGACTTTGACCCC
 C G T A C A T G A C T G C A G T C T A G C G T A A G T C C G A T A G C T C G A T T C G A G A C T A C T G G T A C C G A T C T A G
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGGDGACTTTAHKCTG-
--TGGACTTTGNNCTCN
 C G T A C A T G A C T G C A G T C T A G C G T A A G T C C G A T A G C T C G A T T C G A G A C T A C T G G T A C C G A T C T A G A C G T
A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGGDGACTTTAHKCTG--
--TGGACTTTGNNCTNTG
 C G T A C A T G A C T G C A G T C T A G C G T A A G T C C G A T A G C T C G A T T C G A G A C T A C T G G T A C C G A T C T A G A C G T A C G T
A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.52
Offset:12
Orientation:forward strand
Alignment:AGGDGACTTTAHKCTG--
------------GCTGTG
 C G T A C A T G A C T G C A G T C T A G C G T A A G T C C G A T A G C T C G A T T C G A G A C T A C T G G T A C C G A T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:AGGDGACTTTAHKCTG--
---TGACANARRCCAGRC
 C G T A C A T G A C T G C A G T C T A G C G T A A G T C C G A T A G C T C G A T T C G A G A C T A C T G G T A C C G A T C T A G A C G T A C G T
A C G T A C G T A C G T C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:8
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:AGGDGACTTTAHKCTG
---TGACCTTGACCT-
 C G T A C A T G A C T G C A G T C T A G C G T A A G T C C G A T A G C T C G A T T C G A G A C T A C T G G T A C C G A T C T A G
A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:9
Score:0.48
Offset:2
Orientation:forward strand
Alignment:AGGDGACTTTAHKCTG
--AGGTCTCTAACC--
 C G T A C A T G A C T G C A G T C T A G C G T A A G T C C G A T A G C T C G A T T C G A G A C T A C T G G T A C C G A T C T A G
A C G T A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:10
Score:0.47
Offset:3
Orientation:reverse strand
Alignment:AGGDGACTTTAHKCTG
---TNCCTTTGATGT-
 C G T A C A T G A C T G C A G T C T A G C G T A A G T C C G A T A G C T C G A T T C G A G A C T A C T G G T A C C G A T C T A G
A C G T A C G T A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T