Information for 23-AGTAKAAAGC (Motif 40)

C G T A C T A G C G A T C G T A A C T G C G T A C G T A C T G A A C T G A G T C
Reverse Opposite:
A C T G A G T C A G C T A C G T A C G T T G A C G C A T C G T A A G T C G C A T
p-value:1e-4
log p-value:-9.587e+00
Information Content per bp:1.754
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif3.28%
Number of Background Sequences with motif582.6
Percentage of Background Sequences with motif1.27%
Average Position of motif in Targets52.8 +/- 30.0bp
Average Position of motif in Background47.9 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AGTAKAAAGC
ACATCAAAGG
 C G T A C T A G C G A T C G T A A C T G C G T A C G T A C T G A A C T G A G T C
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

TCF7L2/MA0523.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AGTAKAAAGC--
AAAGATCAAAGGAA
 A C G T A C G T C G T A C T A G C G A T C G T A A C T G C G T A C G T A C T G A A C T G A G T C A C G T A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGTAKAAAGC
GGAACAAAGR
 C G T A C T A G C G A T C G T A A C T G C G T A C G T A C T G A A C T G A G T C
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGTAKAAAGC--
ACATCAAAGGNA
 C G T A C T A G C G A T C G T A A C T G C G T A C G T A C T G A A C T G A G T C A C G T A C G T
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGTAKAAAGC
ACWTCAAAGG
 C G T A C T A G C G A T C G T A A C T G C G T A C G T A C T G A A C T G A G T C
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGTAKAAAGC
AAAACAAAGG
 C G T A C T A G C G A T C G T A A C T G C G T A C G T A C T G A A C T G A G T C
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AGTAKAAAGC
---ACAAAG-
 C G T A C T A G C G A T C G T A A C T G C G T A C G T A C T G A A C T G A G T C
A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGTAKAAAGC----
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T C G T A C T A G C G A T C G T A A C T G C G T A C G T A C T G A A C T G A G T C A C G T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0083.1_Tcf7_1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGTAKAAAGC----
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T C G T A C T A G C G A T C G T A A C T G C G T A C G T A C T G A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGTAKAAAGC----
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T C G T A C T A G C G A T C G T A A C T G C G T A C G T A C T G A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T