Information for 3-ACTATCTCGCACC (Motif 4)

C G T A A G T C A C G T C G T A A C G T A G T C A C G T A G T C C A T G A G T C C T G A A G T C A G T C
Reverse Opposite:
A C T G A C T G A G C T T A C G G T A C A C T G C G T A A C T G C G T A C G A T C G T A A C T G A C G T
p-value:1e-14
log p-value:-3.332e+01
Information Content per bp:1.938
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.1 +/- 23.1bp
Average Position of motif in Background93.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:ACTATCTCGCACC-
-CTGTCTGTCACCT
 C G T A A G T C A C G T C G T A A C G T A G T C A C G T A G T C C A T G A G T C C T G A A G T C A G T C A C G T
A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ACTATCTCGCACC-
--TGTCTGDCACCT
 C G T A A G T C A C G T C G T A A C G T A G T C A C G T A G T C C A T G A G T C C T G A A G T C A G T C A C G T
A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

MGA/MA0801.1/Jaspar

Match Rank:3
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:ACTATCTCGCACC-
------TCACACCT
 C G T A A G T C A C G T C G T A A C G T A G T C A C G T A G T C C A T G A G T C C T G A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

EOMES/MA0800.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ACTATCTCGCACC--
--NTTTTCACACCTT
 C G T A A G T C A C G T C G T A A C G T A G T C A C G T A G T C C A T G A G T C C T G A A G T C A G T C A C G T A C G T
A C G T A C G T C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

TBX15/MA0803.1/Jaspar

Match Rank:5
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:ACTATCTCGCACC-
------TCACACCT
 C G T A A G T C A C G T C G T A A C G T A G T C A C G T A G T C C A T G A G T C C T G A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T

TBX1/MA0805.1/Jaspar

Match Rank:6
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:ACTATCTCGCACC-
------TCACACCT
 C G T A A G T C A C G T C G T A A C G T A G T C A C G T A G T C C A T G A G T C C T G A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T

PB0013.1_Eomes_1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ACTATCTCGCACC-----
-NNTTTTCACACCTTNNN
 C G T A A G T C A C G T C G T A A C G T A G T C A C G T A G T C C A T G A G T C C T G A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

TBX4/MA0806.1/Jaspar

Match Rank:8
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:ACTATCTCGCACC-
------TCACACCT
 C G T A A G T C A C G T C G T A A C G T A G T C A C G T A G T C C A T G A G T C C T G A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T

TBR1/MA0802.1/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:ACTATCTCGCACC-
----TTTCACACCT
 C G T A A G T C A C G T C G T A A C G T A G T C A C G T A G T C C A T G A G T C C T G A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

TBX5/MA0807.1/Jaspar

Match Rank:10
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:ACTATCTCGCACC-
------TCACACCT
 C G T A A G T C A C G T C G T A A C G T A G T C A C G T A G T C C A T G A G T C C T G A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T